Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2386 |
Symbol | |
ID | 4479621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2864912 |
End bp | 2866585 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639726983 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_870021 |
Protein GI | 117920829 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0150062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.524068 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGATCAGC CTTGGATTAA TCATTTGCCA AAAGATGTAC CTGCCGAGAT TAATGCGGAT CAGTATTCAT CGCTCGTCGA TATGTTCGAG ACGGCGGTGG CCAAATATGC GGATCAACCG GCATTTATCA ACATGGGTGC CACGCTAACT TACCGTAAAC TTGAAGAACG CAGCCGTGCG TTTGCCGCTT ATCTGCAAAA TGAATTGAAA CTCCAAAAGG GTGACCGTGT CGCCCTGATG ATGCCGAACC TGCTGCAATA TCCCATTGCG CTGTTTGGTA TTTTACGTGC GGGCATGGTG GTGGTGAACG TTAACCCGCT TTACACTCCC CGCGAATTAA AGCACCAATT AGTCGACTCT GGCGCTAAGG CCATTGTGGT CGTATCAAAC TTTGCCCGTA CCTTGGAAGA AGTTGTAGAC CAGACGCCCG TTAAAAGCGT GATTATCACC GGGCTTGGGG ATCTGCTAAG CGCGCCAAAA CGCACCTTAG TTAACTTTGT GGTCAAGTAC ATCAAAAAGC TGGTGCCTAA ATACGACTTA CCCCATGCAC TTTCAATGCG CGAAACTCTC TCTAGAGGGC GCAGAATGCA GTATGTCAAA CCCGTTATCA CGGGTGATGA CCTAGCCTTT TTGCAATACA CTGGTGGAAC GACTGGGGTG TCAAAGGGCG CCATGTTGAC CCACAAAAAC GTGGTCGCAA ACGTATTACA GGCCAATGGT GCCTATTCAC CCGCACTGCG TGATGGCAAC GAATTTGTGG TAACAGCCTT GCCGCTTTAC CATATTTTTG CTTTAACAGT GAACTGCTTA CTGTTCTTAC ATAAGGGCAG CCAAAACCTG TTAATCACTA ATCCTCGGGA TATTCCAGGG TTTGTGGCCG AACTGAAAAA ATATCCTTTT ACGGCACTAA CGGGCGTCAA CACCCTGTTT AATGCGTTAG TGAACAGTAG CGATTTTGCG GAACTGGATT TTTCTCGCCT AAAATTATCC ATTGGTGGCG GGATGGCGGT GCAAAAAGCC GTGGCCGATA AATGGCAAAG CATCACGAAA ACCCGTTTAC TCGAAGGTTA CGGTTTAACC GAAGCCTCGC CGTTACTCAC TTGCTGCCCC TATAACTTAG ACGGTTACAA CGGTTCTATC GGTTTCCCTG CACCATCAAC CTTAATTCAA GTGCGTGATG ATGCGGGTAA TGTGTTACCG CAGGGTGAGA CGGGTGAACT GTTTGGTAAA GGTCCACAGA TCATGAAAGG CTACTGGCAG CGTCCAGAGG AAACGGCCAA AGTGATTGAT AAAGACGGCT GGCTTGCCAC CGGCGATATC GGTTATATGG ATGAACAAGG CTTCTTCTAT ATCGTCGACC GTAAGAAAGA CATGATTTTA GTGTCGGGCT TCAACGTCTT CCCCAATGAA GTTGAAGAAG TGGTCGCGTT ACATCCTAAA GTGATTGAAG TGGCCGCCGT TGGCGTACCA AATGACGCCA GTGGTGAATT AGTGAAGGTG TTTGTGGTTG CAAAAGATAA ATCTTTAACC GCTGACGACA TCATTAAGCA TTGCCGCGCG CATTTAACGG GATATAAAGT ACCGAAGCTG GTAGAATTTA GGGACGAGTT ACCTAAAACC AACGTGGGTA AGATCTTGCG ACGAGAACTT CGAGACGAAG TGAAGCGCGC GTAA
|
Protein sequence | MDQPWINHLP KDVPAEINAD QYSSLVDMFE TAVAKYADQP AFINMGATLT YRKLEERSRA FAAYLQNELK LQKGDRVALM MPNLLQYPIA LFGILRAGMV VVNVNPLYTP RELKHQLVDS GAKAIVVVSN FARTLEEVVD QTPVKSVIIT GLGDLLSAPK RTLVNFVVKY IKKLVPKYDL PHALSMRETL SRGRRMQYVK PVITGDDLAF LQYTGGTTGV SKGAMLTHKN VVANVLQANG AYSPALRDGN EFVVTALPLY HIFALTVNCL LFLHKGSQNL LITNPRDIPG FVAELKKYPF TALTGVNTLF NALVNSSDFA ELDFSRLKLS IGGGMAVQKA VADKWQSITK TRLLEGYGLT EASPLLTCCP YNLDGYNGSI GFPAPSTLIQ VRDDAGNVLP QGETGELFGK GPQIMKGYWQ RPEETAKVID KDGWLATGDI GYMDEQGFFY IVDRKKDMIL VSGFNVFPNE VEEVVALHPK VIEVAAVGVP NDASGELVKV FVVAKDKSLT ADDIIKHCRA HLTGYKVPKL VEFRDELPKT NVGKILRREL RDEVKRA
|
| |