| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2376 |
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| Symbol | |
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| ID | 4479611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2855888 |
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| End bp | 2857363 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639726973 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_870011 |
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| Protein GI | 117920819 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.338708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0711537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTCT CCCAACTTGG ATTACACAGC GCGCTTGTCA AAGCTGTGAC TGAACTGGGT
TACACGACCC CCACGCCGAT ACAGACAAAG GCCATCCCCA GCATTTTAGC GGGCAAGAAT
GTGCTTGCTG CGGCGCAAAC GGGTACAGGT AAAACCGCCA GTTTTGTGCT GCCGCTGTTG
CACAGATTCG CTGACGCGCC CAAGATCCGC CCTAAGCGAG TGCGGGCCAT CATACTCACC
CCCACACGTG AGTTAGCGCT TCAGGTCGAA GAAAATATCA ACCAATACGC CAAGTATTTA
CCCTTAACGG CCATGGCGAT GTACGGTGGT GTCGACGCCG CGCCGCAAAA GAAACGGCTG
ATTGAAGGCG TCGATTTACT GGTGGCCACG CCTGGGCGTT TGCTCGACAT GTATACCCAA
AGGGCCATTC GTTTCGATGA AGTCTCAGTA TTGGTGCTCG ACGAAGCCGA CCGCATGCTC
GATATGGGCT TTATCGAAGA TATTAATAGC ATCATAGAAA AACTCCCCGA GCAGCGACAA
AACCTTTTAT TTTCAGCCAC CTTATCGAAA CAGGTGAAAG CGCTGGCGAA ATCCGCGATT
CCGGACGCCA TCGAGATTGA AATCAGCCGT AAGAGCGCAG CATCGACTCA TATTGACCAA
TGGTTGACCA CGGTCGATAA AGATAAAAAG TCGGCGCTGT TGAGCCATTT GATCCAAGAA
CAAAACTGGT CACAGGCATT AATTTTTATC CAAACCAAAC ACGGCGCTGC CAAATTGGTT
AGCCAGTTAG AAAAGCGTGG CATTGTTGCA GAAGCTTTTC ACAGTGGGCG TAGCCAAGCG
GTGCGCGAAC AACTGCTTAT CGATTTTAAA GCGGGTAAAG TCTCCTTCTT GGTCGCTACG
GGTGTGGCCT CACGCGGTAT TGATATCGAT GCCTTAGCGC GGGTGATTAA CTACGACTTA
CCCGATGAAG CCGACGACTA TATTCACCGC ATTGGCCGTA CCGGACGTGC GGGTAACCAA
GGGGAAGCGA TTTCCTTTGT TTCTAAGGAT GATTTCAGAA ACCTATGCGC CATCGAACGT
CGCTTAGGTC ATGTTATCGT GCGCAGGGAG ATTGCTGGCT TTGAGCCGAA AAAAGTCGTG
CCGATTTCTA TACTCGATTT TGTGCCTAAA TCCGCGTCTA AAACAGAGCG TAAGCCTAAT
AGCCCCGCCG AGACCAACCT ACAATCTCGC CCCTATTCGA GTGGCAAACC GGGCACCTTT
GAGGCGACAC AAGCCAAGAA GCATCGCAGT GCCAAGGCGG CTCCAGCGCC TAAAGCCCAA
AAAACAGGGA CTGATAGTCG CTCAGATACT CACTCAGGTG CTCGCTCAAA TAGCCGCCCT
GCGAATCCAC TGCAAGGTAA TCCATGGCAA AACAGCATCA AGCCACAGGG CGATAGCGAA
CCCCATGCAA ATCCTTGGCA CAAAAGCACT AAGTGA
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| Protein sequence | MPFSQLGLHS ALVKAVTELG YTTPTPIQTK AIPSILAGKN VLAAAQTGTG KTASFVLPLL
HRFADAPKIR PKRVRAIILT PTRELALQVE ENINQYAKYL PLTAMAMYGG VDAAPQKKRL
IEGVDLLVAT PGRLLDMYTQ RAIRFDEVSV LVLDEADRML DMGFIEDINS IIEKLPEQRQ
NLLFSATLSK QVKALAKSAI PDAIEIEISR KSAASTHIDQ WLTTVDKDKK SALLSHLIQE
QNWSQALIFI QTKHGAAKLV SQLEKRGIVA EAFHSGRSQA VREQLLIDFK AGKVSFLVAT
GVASRGIDID ALARVINYDL PDEADDYIHR IGRTGRAGNQ GEAISFVSKD DFRNLCAIER
RLGHVIVRRE IAGFEPKKVV PISILDFVPK SASKTERKPN SPAETNLQSR PYSSGKPGTF
EATQAKKHRS AKAAPAPKAQ KTGTDSRSDT HSGARSNSRP ANPLQGNPWQ NSIKPQGDSE
PHANPWHKST K
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