Gene Shewana3_2353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2353 
Symbol 
ID4479586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2829650 
End bp2831923 
Gene Length2274 bp 
Protein Length757 aa 
Translation table11 
GC content43% 
IMG OID639726948 
Producthypothetical protein 
Protein accessionYP_869988 
Protein GI117920796 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000143717 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTCCTC CTGTACGCAA CACCAGCAAA AAATTAAAGG AATTTTTAAG CAAATATTTT 
GCACCAGAGC ATTTGAATCC AGAGCTCAAG CAAACGCTGT TAATGCAACT AGCCTATAGT
ATTCAAGCAT TTCCAGCAGG CTATTGGGAG CAATTCGAAC TAATAGATAG GCTAGTAAAA
ATTCTGATAA CAAAAATGCC TTCAGGCTCT GTCAGTAACA CTGAAATATT TGGAATTTTA
AAGAAAAATA AGCATCTTAC ATCATACCCA TTTGCTGCCA CCATTTGTGC AGTGTTACCC
CCAAATGCCA CACCACAATG GAGAACGAAA TACACGGCAT ACCAATCGAT TGTTCTTATC
TGTTGTTTCA TACGCTATAC CCATGACCAG CAACTCGCAA CCTCAGGAAA TGAAAATGCA
TTACGCGAGC TACGTCTGGT AGCGATGGAC CCCAAGCATC GAAAACTATT AGATATACTG
CCAGAATTGG ATGACGCATC ATCAGTTGAA CGACTGGTGT CAAAACTTAA AGAACTACGA
AAGGAAAAAT ATCCTGCCCC GCAAGAGTAC GGCCTTGGCT ACTTGGAGTT AGTGCTTAGA
GAAGCTGTAT CAGGGAGCAA AAGACGACGA AGAAGAATTA GAATACCTCC TATTTCAGAC
CCTGACACCT TCATCGAACT TAATCCCGTT GATGCATTTG AAGACGCAGG CCTTGAGGTT
AAAGAACTAT GTGTCGCATT CACAAAACCG ACGACGGCTC AAGAACGAGA TGAGGCTATA
TCGGTAACAG CTGGTCGAAC ATTTCGTATT GAAGATAAAC CCTTAACGAA TAAACTAAAA
ACACCCCCTC CCCCATCCTC AAGAGCGGTA CGGGCTATAC AGCATAAGTG TCTGACTGAA
AAACTCGGCA TTATGCAGTT ATCCTTAAAT TGCAGTTACA ATCAACTGAC CGAATGGGAT
ATATGTCAAC TCATTCGTTT TACGACCAAT GGAATTAAAA CTGGAGTAAA CCCAGATAGC
TGCTCAACCC TACTGCTGTG CCTGCTATGC GGTCGAGATC CTATTTCACT AGGACAATCT
TCAAATACAT TTTGTCTCAC ACATTACAAA AATCGCCCTT GCATATCTCT AACCCACACA
GTACCAGCAA GCAAACAAGA TGTAAGACTA GAAAAATGTT TGAACAATAT AACAAACCAT
TTAGTGCTGC CGCTCCCTCA ATTTTTACAA GATAAGCTTA CTCAAAACGT GGGCACTGCA
GACTTGAAGT CCGTCATTAA TGACATCAAC AAGCAGCACC GATGTCGTTT AAGTCTCGGA
AGAATCACCC GTTTTCTTGA ACACTGGTAT ATCAATAATG GACTAGATCG TGCCGAAGTC
GGACTCATAA AAGGGCGAGC CCCCCGAAAC CAGCCAGCAC TGAGCTATTC AAATTTCGAT
GCAGATAAAC TGATTGAAAA CCACCACAGA TACGTGAGTT CAATCTTCGA GATGGCTAAG
ATCGATTCGC AACTCCCCGA AGTAAAGCCC ATCAAAAAGC AACTGGGAAG TGCATTACAT
CTCCCTCCAC GGACTTTACA CAATTTTTTT CGCGTTTTGA GGAGTCAAAT TCCTCGCCCG
CGAAAGCAAT CTTTGGAAGA ACTCACGACA CTACATAATC ACTATGTCTG CTACGTATGG
GCGCTTTTGA CGTTTGCAAC CGGTCACCGC GATGTTAATG CACCAATGGG ACAGCGTACC
GATTTCAACA GCCATAACAA TACCTGGTGG ATTAGCGATA AAGAAAACCG ACATGGGATA
TCTGCTAGAA CGCTGATACT TCCACAGACT GCAGTGAAGC AACTTGAACA TTATCTACAA
CATCTTCAAG AGTTGAAAAA ACGCAGTCAA CTCATCGCAA AAGATATTTT CAAACGTGCA
GACGAGGCAA TGACAGGCAG CGGAAATCTT CTATTTTTTA TAAAACATCA AGAACAGGAC
AACATCCCCC AAATTACGCA AGAACTCACG CCTGCCAGAG TAAAAGCATT TCTTGGAGAC
CAGTTACCCT GGCCTGGCAA CTGGGGGAGG CATCACATGC GTAGCGAATT AAAGCGTCTC
GGTGTTGTTC CGGCAGAGAT AGATGGTTGG ATGGGACACG AAGATATTGG AGAAGAATCA
ATGGGTCGTC ATAGCATGCT ATCAACTCAA TACCTCAACC GTATTGCTCA GCATATCGAA
ACGCTACTGA ACACTCATGA AATTACGGTG GTTGATGCAT GGAAAACCCG CTGA
 
Protein sequence
MTPPVRNTSK KLKEFLSKYF APEHLNPELK QTLLMQLAYS IQAFPAGYWE QFELIDRLVK 
ILITKMPSGS VSNTEIFGIL KKNKHLTSYP FAATICAVLP PNATPQWRTK YTAYQSIVLI
CCFIRYTHDQ QLATSGNENA LRELRLVAMD PKHRKLLDIL PELDDASSVE RLVSKLKELR
KEKYPAPQEY GLGYLELVLR EAVSGSKRRR RRIRIPPISD PDTFIELNPV DAFEDAGLEV
KELCVAFTKP TTAQERDEAI SVTAGRTFRI EDKPLTNKLK TPPPPSSRAV RAIQHKCLTE
KLGIMQLSLN CSYNQLTEWD ICQLIRFTTN GIKTGVNPDS CSTLLLCLLC GRDPISLGQS
SNTFCLTHYK NRPCISLTHT VPASKQDVRL EKCLNNITNH LVLPLPQFLQ DKLTQNVGTA
DLKSVINDIN KQHRCRLSLG RITRFLEHWY INNGLDRAEV GLIKGRAPRN QPALSYSNFD
ADKLIENHHR YVSSIFEMAK IDSQLPEVKP IKKQLGSALH LPPRTLHNFF RVLRSQIPRP
RKQSLEELTT LHNHYVCYVW ALLTFATGHR DVNAPMGQRT DFNSHNNTWW ISDKENRHGI
SARTLILPQT AVKQLEHYLQ HLQELKKRSQ LIAKDIFKRA DEAMTGSGNL LFFIKHQEQD
NIPQITQELT PARVKAFLGD QLPWPGNWGR HHMRSELKRL GVVPAEIDGW MGHEDIGEES
MGRHSMLSTQ YLNRIAQHIE TLLNTHEITV VDAWKTR