Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2353 |
Symbol | |
ID | 4479586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2829650 |
End bp | 2831923 |
Gene Length | 2274 bp |
Protein Length | 757 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639726948 |
Product | hypothetical protein |
Protein accession | YP_869988 |
Protein GI | 117920796 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000143717 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACTCCTC CTGTACGCAA CACCAGCAAA AAATTAAAGG AATTTTTAAG CAAATATTTT GCACCAGAGC ATTTGAATCC AGAGCTCAAG CAAACGCTGT TAATGCAACT AGCCTATAGT ATTCAAGCAT TTCCAGCAGG CTATTGGGAG CAATTCGAAC TAATAGATAG GCTAGTAAAA ATTCTGATAA CAAAAATGCC TTCAGGCTCT GTCAGTAACA CTGAAATATT TGGAATTTTA AAGAAAAATA AGCATCTTAC ATCATACCCA TTTGCTGCCA CCATTTGTGC AGTGTTACCC CCAAATGCCA CACCACAATG GAGAACGAAA TACACGGCAT ACCAATCGAT TGTTCTTATC TGTTGTTTCA TACGCTATAC CCATGACCAG CAACTCGCAA CCTCAGGAAA TGAAAATGCA TTACGCGAGC TACGTCTGGT AGCGATGGAC CCCAAGCATC GAAAACTATT AGATATACTG CCAGAATTGG ATGACGCATC ATCAGTTGAA CGACTGGTGT CAAAACTTAA AGAACTACGA AAGGAAAAAT ATCCTGCCCC GCAAGAGTAC GGCCTTGGCT ACTTGGAGTT AGTGCTTAGA GAAGCTGTAT CAGGGAGCAA AAGACGACGA AGAAGAATTA GAATACCTCC TATTTCAGAC CCTGACACCT TCATCGAACT TAATCCCGTT GATGCATTTG AAGACGCAGG CCTTGAGGTT AAAGAACTAT GTGTCGCATT CACAAAACCG ACGACGGCTC AAGAACGAGA TGAGGCTATA TCGGTAACAG CTGGTCGAAC ATTTCGTATT GAAGATAAAC CCTTAACGAA TAAACTAAAA ACACCCCCTC CCCCATCCTC AAGAGCGGTA CGGGCTATAC AGCATAAGTG TCTGACTGAA AAACTCGGCA TTATGCAGTT ATCCTTAAAT TGCAGTTACA ATCAACTGAC CGAATGGGAT ATATGTCAAC TCATTCGTTT TACGACCAAT GGAATTAAAA CTGGAGTAAA CCCAGATAGC TGCTCAACCC TACTGCTGTG CCTGCTATGC GGTCGAGATC CTATTTCACT AGGACAATCT TCAAATACAT TTTGTCTCAC ACATTACAAA AATCGCCCTT GCATATCTCT AACCCACACA GTACCAGCAA GCAAACAAGA TGTAAGACTA GAAAAATGTT TGAACAATAT AACAAACCAT TTAGTGCTGC CGCTCCCTCA ATTTTTACAA GATAAGCTTA CTCAAAACGT GGGCACTGCA GACTTGAAGT CCGTCATTAA TGACATCAAC AAGCAGCACC GATGTCGTTT AAGTCTCGGA AGAATCACCC GTTTTCTTGA ACACTGGTAT ATCAATAATG GACTAGATCG TGCCGAAGTC GGACTCATAA AAGGGCGAGC CCCCCGAAAC CAGCCAGCAC TGAGCTATTC AAATTTCGAT GCAGATAAAC TGATTGAAAA CCACCACAGA TACGTGAGTT CAATCTTCGA GATGGCTAAG ATCGATTCGC AACTCCCCGA AGTAAAGCCC ATCAAAAAGC AACTGGGAAG TGCATTACAT CTCCCTCCAC GGACTTTACA CAATTTTTTT CGCGTTTTGA GGAGTCAAAT TCCTCGCCCG CGAAAGCAAT CTTTGGAAGA ACTCACGACA CTACATAATC ACTATGTCTG CTACGTATGG GCGCTTTTGA CGTTTGCAAC CGGTCACCGC GATGTTAATG CACCAATGGG ACAGCGTACC GATTTCAACA GCCATAACAA TACCTGGTGG ATTAGCGATA AAGAAAACCG ACATGGGATA TCTGCTAGAA CGCTGATACT TCCACAGACT GCAGTGAAGC AACTTGAACA TTATCTACAA CATCTTCAAG AGTTGAAAAA ACGCAGTCAA CTCATCGCAA AAGATATTTT CAAACGTGCA GACGAGGCAA TGACAGGCAG CGGAAATCTT CTATTTTTTA TAAAACATCA AGAACAGGAC AACATCCCCC AAATTACGCA AGAACTCACG CCTGCCAGAG TAAAAGCATT TCTTGGAGAC CAGTTACCCT GGCCTGGCAA CTGGGGGAGG CATCACATGC GTAGCGAATT AAAGCGTCTC GGTGTTGTTC CGGCAGAGAT AGATGGTTGG ATGGGACACG AAGATATTGG AGAAGAATCA ATGGGTCGTC ATAGCATGCT ATCAACTCAA TACCTCAACC GTATTGCTCA GCATATCGAA ACGCTACTGA ACACTCATGA AATTACGGTG GTTGATGCAT GGAAAACCCG CTGA
|
Protein sequence | MTPPVRNTSK KLKEFLSKYF APEHLNPELK QTLLMQLAYS IQAFPAGYWE QFELIDRLVK ILITKMPSGS VSNTEIFGIL KKNKHLTSYP FAATICAVLP PNATPQWRTK YTAYQSIVLI CCFIRYTHDQ QLATSGNENA LRELRLVAMD PKHRKLLDIL PELDDASSVE RLVSKLKELR KEKYPAPQEY GLGYLELVLR EAVSGSKRRR RRIRIPPISD PDTFIELNPV DAFEDAGLEV KELCVAFTKP TTAQERDEAI SVTAGRTFRI EDKPLTNKLK TPPPPSSRAV RAIQHKCLTE KLGIMQLSLN CSYNQLTEWD ICQLIRFTTN GIKTGVNPDS CSTLLLCLLC GRDPISLGQS SNTFCLTHYK NRPCISLTHT VPASKQDVRL EKCLNNITNH LVLPLPQFLQ DKLTQNVGTA DLKSVINDIN KQHRCRLSLG RITRFLEHWY INNGLDRAEV GLIKGRAPRN QPALSYSNFD ADKLIENHHR YVSSIFEMAK IDSQLPEVKP IKKQLGSALH LPPRTLHNFF RVLRSQIPRP RKQSLEELTT LHNHYVCYVW ALLTFATGHR DVNAPMGQRT DFNSHNNTWW ISDKENRHGI SARTLILPQT AVKQLEHYLQ HLQELKKRSQ LIAKDIFKRA DEAMTGSGNL LFFIKHQEQD NIPQITQELT PARVKAFLGD QLPWPGNWGR HHMRSELKRL GVVPAEIDGW MGHEDIGEES MGRHSMLSTQ YLNRIAQHIE TLLNTHEITV VDAWKTR
|
| |