Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2338 |
Symbol | |
ID | 4478095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2811782 |
End bp | 2812858 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639726933 |
Product | permease |
Protein accession | YP_869973 |
Protein GI | 117920781 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.677868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0877008 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCCG AAACTATCAC TATACTGAAA GAAACGGTCA ATATGTTCGT CTTTCTTGCA TTTGAGCTAA CCTTGTTATT TCTTGCCATA AGCTACCTCG TCGGTATGCT GCAAGAATTC ATCACGCCGC AAAAAGTGCA ATCCATATTA AGTTCCCGCC ATGGTCGAGG CTATATAGTG GCCGCCTTGC TCGGGTCTAT CACTCCCTTT TGCTCCTGCT CCACTATCCC ATTCTTAAAA GGTTTACTCA GGGCCCGTGC GGGATTTGGC CCTATGATGG TATTCCTATT TGCCAGCCCA TTACTTAATC CGGTGATTAT CGGGCTTTTT GTGGTCACCT TTGGGTTTAA GGTCGCGCTA TTTTATTTTA CGGTCGCTCT GGGTGTCTCT GTAATAGCAG GTTACTTGCT GGAAAAACTC GGATTTGAAC AATATGTGCG TCAAGAGGCC TATGCTCAGG CAGATACAGC CACTGCTGCT TCATGTTGCG ATACTAAACC GTCACCGACC GCGAGTAGCG GTTGCGAAGT AACCCCCGCA CCCGTTGTCA GCGCATGTTG TGATAGTAAA ACCGCCCCCG CGGTGACCTT GTGTTGCGTT ACTCAAGCTG AGCCTATTGC AACTTCGTGT TGCCCTTCCC AAACCGTGCC GCAAAACAAA CCTCAGAGCC GCTGGGTAAA GGTTTGGCGC GCCACTTGGA AGGACTTCAA ACAAGTGCTG CCCTATCTGT TTATCGGTGT GCTATTGGGT TCAATGATCT ACGGATTTAT GCCAACGGAG TTAATCGTTC AGTATGCTGG AGAAGCCACA TGGTATGCGA TCCCCATTGC CGCATTAATT GGGATCCCAC TCTATATTCG CGCCGAAGCG GTTATCCCAC TCAGCGCCGC GTTAATCCAA AAAGGCATGG CGATGGGCTC AGTAATGGCG TTGATCATAG GGAGCGCCGG AGCAAGTTTG ACCGAAGTCA TATTACTTAA AGCCATTTTT AAAGGTCAGA TGATTGCCGC ATTTCTCAGC GTTATTTTAG GCATGGCTGT GGGTGCAGGG TTTCTGTATA GCTATCTATT TAGCTAA
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Protein sequence | MTPETITILK ETVNMFVFLA FELTLLFLAI SYLVGMLQEF ITPQKVQSIL SSRHGRGYIV AALLGSITPF CSCSTIPFLK GLLRARAGFG PMMVFLFASP LLNPVIIGLF VVTFGFKVAL FYFTVALGVS VIAGYLLEKL GFEQYVRQEA YAQADTATAA SCCDTKPSPT ASSGCEVTPA PVVSACCDSK TAPAVTLCCV TQAEPIATSC CPSQTVPQNK PQSRWVKVWR ATWKDFKQVL PYLFIGVLLG SMIYGFMPTE LIVQYAGEAT WYAIPIAALI GIPLYIRAEA VIPLSAALIQ KGMAMGSVMA LIIGSAGASL TEVILLKAIF KGQMIAAFLS VILGMAVGAG FLYSYLFS
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