| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2312 |
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| Symbol | |
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| ID | 4478069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2780573 |
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| End bp | 2783398 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639726907 |
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| Product | 1-(5-phosphoribosyl)-5- |
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| Protein accession | YP_869947 |
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| Protein GI | 117920755 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.191816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGAT TTAAACCCAG CTTGCTGACC TTAGCACTCG TTGCTGCTGG CGCCAGTATG
CACTCCTACG CAGCAGATGA TGTAAAAGAA AAAGACCTAA AAGCCAAAGA TGCCGAAATT
GAAGTAATCC AAGTTAAAGG CTTCAGAACC AGTGTGATCA AATCGCTTAA TGAAAAACGT
TTTGGCGATA CCGTATCTGA ATCTATCTCT GCCGACGATC TCGGCGCCCT GCCCGACCAA
TCTATCGCCG ATGCGTTAAC CCGTTTACCG GGCGTGACCG CTGTTCGTAC TGGCGGTCAA
GCCAGTGGGC TGAATATCCG TGGTCTGGAT GGCGATTTCG TGTTTGCCAC CCTCAATGGC
CACGAACAAG TGACCACTGG CGGTAAACGC GCCATTGAGT TTGACCAATA TCCATCTGAA
TTAATCAGTC AAGCGGCAGT TTATAAAACC CCGAAAGCCT CGCTGATCGA AGGCGGCGTG
GCCGGTACGG TTGAATTAAA AACCGCCGAT CCGCTAAAGA ATGACAAAGA CCAATCATTC
AATATCAATG CCCGTGGCAG CTTTAACGAT CGCGCCGATG AAATCTCCGA TGCCGAGCAA
TACGGCAATC GTTTAAGTCT TGCTTATCAA GGTAAATTCC TCGAAGACAC CTTAGGGGTT
GCAGTGGGCT ATGCTCACCT GTATCAACCT TATGTTGCGA GCCAATTCAT TGGCTTACGT
TTTAATGATG ACAAAAAAGA CGTTAACGGT GACGGTGTAA CCGAAGCGAT CAGTGAAGGT
TTTGAACTGC AACAAAAAGG CGGCGACGAC ACCCGTGATG GCTATATGGC GGCTATTCAT
TGGCAACCGA GTGATAGCCT GAGTGTGAAA GGCGATCTGT TCCACTCTAA ATTTACCTCT
GAAAACTTTG CCCGTGGTTT CCGCGTGAAA TCATTGAAAA ATGGCACCAT CAGTGATGCC
GTTGTCGAAA ATGGTTCTAT GACTGGTGGT ACTGTTTCTG TAGGTACCGA TAGTACTGAT
GACTTTTCTA TTTTCGTAAT AAACGATAAT GACTCCAAGT ACTCAGAATT GACTTCAGGC
TCTATAAACC TTGAGTGGAA TAATGGCGGC GCACTGACAG TGGCGGCCGA TGTCAGCTAT
TCCAAAGCCG ATGGTGAATT CGTTAACGGT GGCACCCGCG CTATATTATA CGATGACATT
GGTAATGAAG TACGCTCAGC TGAATCAGTT ACTTATCAAC TGAATGGCTT AAGTCCTGCG
GATGTCAGCT TTACTAACGA CTACACCAAT ACCTCGACCC TAGGTCTAAA AGAAGTGGGT
ATGTGGCCCT ATAATCAGCA AAACGATCTG ATTGCCTACA AACTCGATTT TAACTATGTC
CTAGACACCA GCTTTGTCTC TTCTGTTGAT TTTGGTGTGC GTTATGCTGA GCGCGAGTTT
AATGCCCAAC GTTCACAGGC AGGTTACGGT TTTGAATATG ATAAAAATCC AAGTAACCAA
CCAGTCCTCG CACTTAACGG CGATATGGCC AAAGTGGTTG ATTTTGGAGG AGAACTCTCA
GGTTACCCAA GTTTCCTCGC CATTGACTTT AATAAAGCAC TTGAGTTGGT AAATGCACAA
CTGGCAGCAA CTGGCCAATC ACCCTTCACC CCCACGGCGA ACTGGTCAAA TAACTGGACC
ATGATCCAAA GCGGCGCGGT CAATGAAGAT GTATTAGCTG GCTACGTGCA GGCAAATTTA
GACTTTGATA TTGGTGACGT TAAAGTCACA GGTAACCTGG GTGTGAGAGT GGTACACACA
GATCAAAGCA GTACAGGTCT GCAACAGGTA GGTTATGGTT TAGGTGAAGC TATTACCGAT
GAGCAAGGTG TCGTGAGCAC GGATTATATC CGCAATGAAG TTGGTCAAAC CTATACCGAT
TACCTGCCAT CACTGAACTT GACCTTCCAC CTGACTGAAA ACGATCAACT GCGTTTTGCT
GCAGCCTCTG TGATGTCACG TCCTCCGATT AACAAGTTAA AGTCGGGTAT GGGATCTTGG
TACGATAATG CCTCCACAGA AGGATATAAA AAGTACAATG CATGGGGTAA CACCAGTCCG
TTATTAGATC CTTTCTATGC GGATCAATAT GACTTGTCCT ACGAGCACTA CTTTGAAGAG
TCTGAAGGTG CGGTCGTTAT TGCCTTGTTC TATAAAGATA TTAAATCTTT CATCAACGAC
TTCACCATTC AAAACTACGA TTTTGAAGCG AATGGCTTTA TCGTGCCCGA TACCATTATC
GACAATGGCG TTGAATTCCC AGTTGTAAAA AATGAAGGGC AATATCAAAC AGCCATCAAC
AATGACAACG GCGGTTATAT CCGTGGTATC GAGTTAGGCT ATACCCAAGT GTTTGATTTC
CTACCGTCAC CTTTAGATGG TTTAGGTTTC ACTGGTAGCT ATTCCTATTC AGACAGCGAA
GTCGAATTCA CCACAGACTT AAGCGGTTCT AACCTGACCA TTCCATTACC AGGTCTGTCT
GAAAACGTGC TGAACACTAC CCTGTTCTAC ACCTTGGATG GTTTCGATAC CCGTGTGAGC
ATGAGATACC GTAGTGGCTA TGTATCAGAG CAAGTGGCGG TTGAATCTCA ACTGGCATTC
TTCGATGCGG AAACGATTGT GGATTATCAG GCCTCTTATG CGCTGGATAA TGGCCTAAAG
TTCCTGTTCC AAATCAATAA CCTCACCGAT GAACCGAGCA AAACTTACTT TGGTGAAGAG
CATCAAACCG GGACAATTCA ATACTTCGGT AGACAATATT TCCTTGGTTT AACCTACTCT
CTGTAA
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| Protein sequence | MMRFKPSLLT LALVAAGASM HSYAADDVKE KDLKAKDAEI EVIQVKGFRT SVIKSLNEKR
FGDTVSESIS ADDLGALPDQ SIADALTRLP GVTAVRTGGQ ASGLNIRGLD GDFVFATLNG
HEQVTTGGKR AIEFDQYPSE LISQAAVYKT PKASLIEGGV AGTVELKTAD PLKNDKDQSF
NINARGSFND RADEISDAEQ YGNRLSLAYQ GKFLEDTLGV AVGYAHLYQP YVASQFIGLR
FNDDKKDVNG DGVTEAISEG FELQQKGGDD TRDGYMAAIH WQPSDSLSVK GDLFHSKFTS
ENFARGFRVK SLKNGTISDA VVENGSMTGG TVSVGTDSTD DFSIFVINDN DSKYSELTSG
SINLEWNNGG ALTVAADVSY SKADGEFVNG GTRAILYDDI GNEVRSAESV TYQLNGLSPA
DVSFTNDYTN TSTLGLKEVG MWPYNQQNDL IAYKLDFNYV LDTSFVSSVD FGVRYAEREF
NAQRSQAGYG FEYDKNPSNQ PVLALNGDMA KVVDFGGELS GYPSFLAIDF NKALELVNAQ
LAATGQSPFT PTANWSNNWT MIQSGAVNED VLAGYVQANL DFDIGDVKVT GNLGVRVVHT
DQSSTGLQQV GYGLGEAITD EQGVVSTDYI RNEVGQTYTD YLPSLNLTFH LTENDQLRFA
AASVMSRPPI NKLKSGMGSW YDNASTEGYK KYNAWGNTSP LLDPFYADQY DLSYEHYFEE
SEGAVVIALF YKDIKSFIND FTIQNYDFEA NGFIVPDTII DNGVEFPVVK NEGQYQTAIN
NDNGGYIRGI ELGYTQVFDF LPSPLDGLGF TGSYSYSDSE VEFTTDLSGS NLTIPLPGLS
ENVLNTTLFY TLDGFDTRVS MRYRSGYVSE QVAVESQLAF FDAETIVDYQ ASYALDNGLK
FLFQINNLTD EPSKTYFGEE HQTGTIQYFG RQYFLGLTYS L
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