| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2285 |
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| Symbol | |
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| ID | 4478042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2746851 |
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| End bp | 2748101 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639726880 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_869920 |
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| Protein GI | 117920728 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0114014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGAC CATTAGCCCT CTCCATTGGT TGGCGTTTTT ATCGTGCGCG CCAATCCAAT
AGTTTTATTA GCTTTATCTC CTTCGCATCG ACCGCGGGGA TTGCGCTCGG GGTTGCGGTG
CTGATTGTGG TGCTCTCGGC CATGAATGGT TTCGAGCGCG AGTTAGAGCA GCGCTTGTTA
GGCGTGATTT CCCAAGCCGA TGTGGTTGGC GTGAATGAGC CGATTGCGGA CTGGCGCGCC
GTTGAGCAAA CCGCTATGCA GATTGAAGGC ATTACGGCGG CGGCACCTTT TATTCGGATG
CAAGGATTAG TGCAAAAGCC CGGTGGTTTT CAGGGGCTTG CCGTTGTAGG AATCGACCCT
GAGCAAGAGG CAAAAGTCTC GACCCTCGCG CAATTTATGT CGAAAGAGAC TTGGCAAGGC
TTGAGCGAGG ATGACAATCA CATCGTCCTT GGCGAGAGCC TGCTGAAAAA GTTAGGCCTC
GAAGTTGGTG ATACCCTCGC TCTGTATGTG CAAGATCTTG ATCCAGAACA TGCCGGCAGT
TTACGGGCGG CCAAGAGCCA TCGTTTTGTG GTGTCGGGTG TGTACCGTTT AGGCGGCGAG
CTTGAGTTAA CCACGGCGTA TATTCCGATG CGCTATGCGG CGAATATCCT GAATTTACAT
CAAGGTGTTA CCGGAGTGCG GATCAGTGTG GCGCAGGTGT TTGATGCGCC AGCGAAAATT
CGTGAGTTGG GTTATGCCTT AAACCAGTCC GTTTATATCA GTGATTGGAC GCGCACCCAA
GGGCATTTAT ATCAAGATAT TCAATTGGTT CGCACTATCA TGTATCTCGT GTTGGTATTA
GTGATTGGTG TGGCCTGTTT TAATATTGTC TCAACGCTCG TGATGGCGGT GCGGGATAAA
GCCAGTGAAA TCGCTATTCT GATGACCATG GGGTTAAGCC GTCTTTCAGT GATGGGGATT
TTTATGGTGC AAGGCGCGTT AAATGGCCTT GTGGGTTGTG CCCTCGGCGG CGTGATTGGG
ATTGCGACCG CGATTAATCT CAGTGGTATC GCCCGTGGCA TTGAGCAGTT GCTTAGTATT
CAACTCCTGT CGGCCGATGT GTATTTTGTG GATTTTCTGC CGTCAGAGCT ACATATGACG
GATGCTGGTT TAGTGATTGC TACGGCATTT GTGATGAGTC TTATCGCAAC TCTGTATCCC
GCGTGGAAGG CAAGCCAAAT TGGCCCTGCA CAGGCGTTGG CGGGTAGATA G
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| Protein sequence | MKGPLALSIG WRFYRARQSN SFISFISFAS TAGIALGVAV LIVVLSAMNG FERELEQRLL
GVISQADVVG VNEPIADWRA VEQTAMQIEG ITAAAPFIRM QGLVQKPGGF QGLAVVGIDP
EQEAKVSTLA QFMSKETWQG LSEDDNHIVL GESLLKKLGL EVGDTLALYV QDLDPEHAGS
LRAAKSHRFV VSGVYRLGGE LELTTAYIPM RYAANILNLH QGVTGVRISV AQVFDAPAKI
RELGYALNQS VYISDWTRTQ GHLYQDIQLV RTIMYLVLVL VIGVACFNIV STLVMAVRDK
ASEIAILMTM GLSRLSVMGI FMVQGALNGL VGCALGGVIG IATAINLSGI ARGIEQLLSI
QLLSADVYFV DFLPSELHMT DAGLVIATAF VMSLIATLYP AWKASQIGPA QALAGR
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