Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2260 |
Symbol | |
ID | 4477685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2721519 |
End bp | 2722034 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639726855 |
Product | hypothetical protein |
Protein accession | YP_869895 |
Protein GI | 117920703 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000187561 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.561597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTCGGC AAAGAACCGC AATGCCAGAC ATCTTGCAGC AGGGACAGGG CATGAGTATT TGGAAAGAGT TATACGACAT TTTTGATAAA GAGCGCAGCC GCTGGCAGCA ATCGACGGCG GGTAAGCAGG CCATCAGCTT CGAATTAAAG GCTAATTTAG GCTTTCTCGC CGATGCCTTG AGCAGTGGTT TACCGCAACA GGCGATAATT CAAGGGCTTG AGTGCACTCT CTTTGAGGCA AAAATCAAAG AGGGTTTAGC GCTGACCAGC CTGAATCGTC GTAAAGTGAC ACTGAAATTT ATCGGTGAAT TTGCCGAGTT TGCTAAATAT GTGGGTAAAG AGAATGCCGA GTTGGTGGAG AATGCCTACT CAAAAATCAA ATCTTTACAA AAGCTCGCAT CGGCAAAACC CGATAACAGT TATGATCTTA AAATTAAATC ACTGTTTCGG TTTTTGGTGT TTATCGTGGC ACATCTTGAG GAGCGTCCGC TCACTCGTCA ATCTGCTAAA GGTTAA
|
Protein sequence | MSRQRTAMPD ILQQGQGMSI WKELYDIFDK ERSRWQQSTA GKQAISFELK ANLGFLADAL SSGLPQQAII QGLECTLFEA KIKEGLALTS LNRRKVTLKF IGEFAEFAKY VGKENAELVE NAYSKIKSLQ KLASAKPDNS YDLKIKSLFR FLVFIVAHLE ERPLTRQSAK G
|
| |