Gene Shewana3_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2260 
Symbol 
ID4477685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2721519 
End bp2722034 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content45% 
IMG OID639726855 
Producthypothetical protein 
Protein accessionYP_869895 
Protein GI117920703 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000187561 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.561597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGGC AAAGAACCGC AATGCCAGAC ATCTTGCAGC AGGGACAGGG CATGAGTATT 
TGGAAAGAGT TATACGACAT TTTTGATAAA GAGCGCAGCC GCTGGCAGCA ATCGACGGCG
GGTAAGCAGG CCATCAGCTT CGAATTAAAG GCTAATTTAG GCTTTCTCGC CGATGCCTTG
AGCAGTGGTT TACCGCAACA GGCGATAATT CAAGGGCTTG AGTGCACTCT CTTTGAGGCA
AAAATCAAAG AGGGTTTAGC GCTGACCAGC CTGAATCGTC GTAAAGTGAC ACTGAAATTT
ATCGGTGAAT TTGCCGAGTT TGCTAAATAT GTGGGTAAAG AGAATGCCGA GTTGGTGGAG
AATGCCTACT CAAAAATCAA ATCTTTACAA AAGCTCGCAT CGGCAAAACC CGATAACAGT
TATGATCTTA AAATTAAATC ACTGTTTCGG TTTTTGGTGT TTATCGTGGC ACATCTTGAG
GAGCGTCCGC TCACTCGTCA ATCTGCTAAA GGTTAA
 
Protein sequence
MSRQRTAMPD ILQQGQGMSI WKELYDIFDK ERSRWQQSTA GKQAISFELK ANLGFLADAL 
SSGLPQQAII QGLECTLFEA KIKEGLALTS LNRRKVTLKF IGEFAEFAKY VGKENAELVE
NAYSKIKSLQ KLASAKPDNS YDLKIKSLFR FLVFIVAHLE ERPLTRQSAK G