Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2258 |
Symbol | |
ID | 4477683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2720417 |
End bp | 2720926 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639726853 |
Product | PTS system glucose-specific transporter subunit |
Protein accession | YP_869893 |
Protein GI | 117920701 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2190] Phosphotransferase system IIA components |
TIGRFAM ID | [TIGR00830] PTS system, glucose subfamily, IIA component |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.085186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.384646 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGATTTT TAAGCCGAAT AAGGCGATTG GTATCAGGGC AACCACAACT GGCTGGCGGC ATTATGGTTT ACGCCCCAGT GAACGGAGAA ATTGTGGCCA TTGAAAAGGT CCCCGATGTG GTATTTGCAG AGAAAATTGT GGGTGATGGT ATCGCCATCG CCCCCAAGGG AGACACGATT GTCGCCCCAA TCGATGGCAC CATAGGTAAA ATTTTTGAGA CTAATCATGC TTTTAGTATT GAGTCGCCAC AGGGATTAGA GCTTTTCGTG CACTTTGGCG TTGGTACCGT TGAGCTAAGG GGGCGAGGTT TTAGCCGTTT AGCGGAGGAA GGCCAAGAGG TCAAAGTGGG CGATCCTATT CTGTCTTTTG ATATTGATTA CCTAAAAGAT CAAGTAGATA GCCTACTCAC TCCCGTTGTG CTGGCCAATA TGGAAGATGT GAAATACTTA GATAAGGCCC AAGGTAGCGT CACCGCAGGT AAAGACGCGA TTTTTACTGT TCAGCTTTAA
|
Protein sequence | MGFLSRIRRL VSGQPQLAGG IMVYAPVNGE IVAIEKVPDV VFAEKIVGDG IAIAPKGDTI VAPIDGTIGK IFETNHAFSI ESPQGLELFV HFGVGTVELR GRGFSRLAEE GQEVKVGDPI LSFDIDYLKD QVDSLLTPVV LANMEDVKYL DKAQGSVTAG KDAIFTVQL
|
| |