Gene Shewana3_2256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2256 
Symbol 
ID4477681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2718351 
End bp2718608 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content46% 
IMG OID639726851 
ProductHPr family phosphocarrier protein 
Protein accessionYP_869891 
Protein GI117920699 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.99583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.188388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAAA AATCTGTCAC TATCACCGCA AAACATGGTA TTCATACCCG CCCAGCCGCC 
CTGTTAGTGA AAGAAGCGAA AACCTTCAAC TGCGATGTGC TAGTTGAATG CAATGGCAAA
CAGGCCAGTG CCAAAAGCTT ATTTAAATTG CAAACATTAG GCCTGTATCA TGGCGTCACC
GTCAAAGTGT TTGCCGAAGG TGAGCAGGCA CAGGAAGCGG TCGAGAAAGT CTCGGAACTG
CTCATCACTT TAAGTTAA
 
Protein sequence
MYEKSVTITA KHGIHTRPAA LLVKEAKTFN CDVLVECNGK QASAKSLFKL QTLGLYHGVT 
VKVFAEGEQA QEAVEKVSEL LITLS