Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2245 |
Symbol | |
ID | 4477670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2700260 |
End bp | 2703964 |
Gene Length | 3705 bp |
Protein Length | 1234 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639726840 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_869880 |
Protein GI | 117920688 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.965648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGT TAATCCAATC CAATCAAATG GAAGTGCTCT GTGCCCATCT TGCCGCGTAT TTGCGCCAGC CGCTACCCGG CGCGGGGTTA TTGCAAAGTG AGCATATTTT GGTGCAAAGC CCCGGGATGT CGACTTGGTT ACGCCTTGAA ATTGCAAAAC AAAATGGTAT TGCCGCCGCG CTGGAGTTCC CACTACCTTC CAGCTTTATT TGGCAACTGT GCCACGATTT ACTCCCCAAT GTCCCCAAGG AAAACGCCTT CACTAAGGCG GCTATGACCT GGAAGCTGAT GCAACTACTG CCGCGGCTAC TGGATGAACC TTCTTTTGGG CCACTGCGCC ATTATTTGGG CCATACCATA GATAATCTGG AATCGAGCGC GGCTGACACC CATAGCAACC ATCAGCTTGG CGCCATAAGC GCCGATGATA TTAAGCTTTA CCAGCTCTGC GGCCGCATCG CCGATATCTT CGACCAGTAT TTAGTTTACC GCCCCGACTG GATTGCCGCG TGGGAAGCTA ATGAGCCGCT CGAATCGCTC AAATTGAATG AGGAGCAAAG CTGGCAACCC ATCCTCTGGC GCGCGCTGAT TGCCTACAAT CGCGATGAGC TGCGTCAAAG CCACTACCAT AGGGCCAATC TGCATCAGGA TTTGATTGCC GCATTGGGGG ATAGCGCCAA TTCCCTCGCA AAATTGCCGC AACGTTTATT TGTGTTTGGG ATCTCCTCCA TGGCGCCCCA AACCATCGAT GTGCTCCACC AGCTCGCGAG CCGCATCGAT GTGATTATCT TAAGCCTTAG CCCCTGTCAG CATTACTGGG GCGACATTAT CGACCCACGC CATCGGGCGC GTATGGCATT GCAATATGCA GGAAAACGCC AATTAGCTGA GCAATGGGAA GATAAACTCG AAGTCGGCAA TCCCCTGCTC GCCAACAATG GCAAGATGGG CCGCGAATTA CTCGATATGC TGCTCGAACT GCCCCCAGAG CACTGTGACT TTGGCGACGA TGTGTACTGC GAGCCCTGCG GCGATCCTAA CGATCCCCAC ACTAACGCAA GTATGCTGGC TGGTGTGCAA TACGATATTT TAGAAATGCA GACACTCGAT CGGGTACTCG GGCCGGATGC TGAGCTATAT CAAGAGGTCG CGAATCGCCG GGTATTAACA GCCGACGATG ATTCGATTCT AATCAAGAGT TGCCACAGCC CGCTTAGGGA AGTCGAAACC CTGCACGATC ATTTACTCGA CCTGCTGGAT AGCGACAACC AACTCACCCC CAAAGACATA GTGGTAATGA TGCCGGATGT CGCCGCCTAC GCCCCCTATA TCGATGCGGT GTTTGCGGCC AAACAGGGAC TGGAATATAT CCCCTATGCC ATTGCCGACC GCGGCGCGGC GCAGGAATCG CCACTCATTA ATAGCTTTTT GAATTTACTC AATATTAATC AGAGCCGTTT CGGACTGACG GATATTTTAA GCATTCTCGA AGTCCCAGCC ATTTTGCGAC GTTTTCAGCT CGAAGAAGAC GAGCTGCCAC TCATTCGCCG CTGGTTAGAT GAAGCAGGTG TGCGTTGGGG CCGCGATGAA CAGAGCCGCC TTAAACAGGG TGTGCCCGCC TTCGAGCAAA ACTCCTGGGC CTTTGGCATA AAACGCTTAA TCTTAGGCTA TGCCTTAAGG GACGATGCGC CGCTATATCA GTCATCCCCG CAGGGAATGC ACTATTTAAC GGTGGCTGGG GTGGAGGGTC AATCGGCACA GGCCCTTGGC AAACTGTTGA ATTTTATTGA AGTCCTCGAT GAGACCACCC AAGTATTAGC CAAGGCGCAA GCGCCCTCAC TGCGGTTACT CGAACTCACC GAGCTGTTAA ACGCCTTTTA CGCCCCCGAT GAGGACGAAC GAGAGCAGCT GCAGGAAATT CGCGATGCGA TTGCCGCCTT AGAGCAAGAG CTACTTGCCG CCAGCCCTGC CGATATGGGT GCACAAGCCA ACGACTTAGA TTTAAGCATC GAAGTGCTGG CGCTTTGGTT TAATCAACGC TTAACCGAGT CACGTGTCGG CCAACGATAC CTCGCGGGCA GCGTAAATTT TTGTACCTTA ATGCCGATGC GCTCGATTCC CTTCAAGGTG GTTTGTCTGC TGGGGATGAA TGATGGTGTC TATCCTAGGG TGCAACATCC TGTGGGCTTT GATCTGATGG CCCATTTGGG TGCGCGCAAA GGCGATCGTT CCCGTAGATT AGATGATAGA TACCTGTATT TAGAGGCGTT ACTCTCGGCT CGGGAGCAGC TGTACATCAG TTATATTGGC CGTAGCGAAC GGGATAACTC GGAGCGTATT CCATCTATGC TGGTCTCCGA GCTAATAGAA TATTGCCAGC TATGTTATTT ACCTGAATCC CTTGCAGCAG AAGCTTCTAA TGTCAGTAAC GAAGTCGCCC AACAGGCATT GCTTGAGGCC ATTGTGAGCC ATCAGCCGCT GCAACCTTTT GATCCTAAAC TGTATCAAGC AGCACTGCCG CAAGCCCTCA CCTCCCATGG GATAAAACAG AGTTATAGCC AGCAGTGGTG TCCGCCCGAT AGCAATAGCC AGTTGCAACA TGGCCGATTT ATCGAAGCCC ATACCCAGAT AGTGCTCGAA GATGACGCAA TTGGTGATAG TGTTCAGGAT ATTGAGCCGC TTGGCGAAGC AGAGCATGTG GATATCTCGG CCTTTATTCG CTTCTTTCGC AATCCCGCGC AGTATTTCTT TAATCGTACC CTGAAAGTCG ATTTAAACCT TAATATTCAA GCAGATGATA ACGATGAGCC CTTTAGTCTT AATGCGTTAG AGCGTTATTT ATTACAGGCT CAGCTCCTTG GCGATGCGCT TGAGCAAGGA CAAAACGAGC CCAGCACTGA ACTGTTACAA CGCCTTAAAG CCAGCGGTAA CTTGCCTATG CAGCCCTTTG ATGATCTGCT ACTGCGCCAA TACAGCCATG ATATCGCGCC GCTGATCGGT AGAACCCTGT TTATGCGCGG CGATGTCGCT CCCCGGCATG CCGATATTCG GCTCAGCTTT GAGTTACCCC ATCAGAACTC TGGAACTCAG TTAAAAGCCA AGCGGGTGAT CCTCGAAGGT CGAATCGATG ATATCAGCCC TAAAGGATTG GTCACTTGCC GCCCCGGCAG TGCCCATGGG CGGGACATTT TAGCCTTGTA TTTACGTCAT TTATGTTTGA TGGCCGCCGG AGTGGCTCAA CCTAGCTACC TGCAACCTAG CTATCTGCTG GATATGGGGC ATTTTCATGC CCTCGCGCCC ATTACGCCAG CGCTTGCCCA TGCGCAGCTT GCCAACTTAT TAAAGTATTT TTATCAGGGC CAAATTCATC CCCTGTGCTT TATGCCAAGA ACCTCCCTCG CCTATGCCAG CGCTGAGGCG CATGAAGCGC AAGACTCGCA CACAAGCACA GACCCGCACA AAGCACGGCT CGAAGCGGCG CAGAGCGAAT GGCTGGACGA GCAAGGTGAA CTTGGCGAAG GCACAGATCC CCATTATCAG CGGCTGTTTC ATTTTCCCGA CGACTTTACC GAGGCACATT TTGGCAAGCT CGCCGATGAC ATCTATCGGC CAATGCTTAG CCTGTATCAC AAGGATACCC TCGCCCAACT CGAGGAATTT GCCCTGAATG AAGCCCAAAC CGCCACGACA GAGGGAGCGC ACTGA
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Protein sequence | MLKLIQSNQM EVLCAHLAAY LRQPLPGAGL LQSEHILVQS PGMSTWLRLE IAKQNGIAAA LEFPLPSSFI WQLCHDLLPN VPKENAFTKA AMTWKLMQLL PRLLDEPSFG PLRHYLGHTI DNLESSAADT HSNHQLGAIS ADDIKLYQLC GRIADIFDQY LVYRPDWIAA WEANEPLESL KLNEEQSWQP ILWRALIAYN RDELRQSHYH RANLHQDLIA ALGDSANSLA KLPQRLFVFG ISSMAPQTID VLHQLASRID VIILSLSPCQ HYWGDIIDPR HRARMALQYA GKRQLAEQWE DKLEVGNPLL ANNGKMGREL LDMLLELPPE HCDFGDDVYC EPCGDPNDPH TNASMLAGVQ YDILEMQTLD RVLGPDAELY QEVANRRVLT ADDDSILIKS CHSPLREVET LHDHLLDLLD SDNQLTPKDI VVMMPDVAAY APYIDAVFAA KQGLEYIPYA IADRGAAQES PLINSFLNLL NINQSRFGLT DILSILEVPA ILRRFQLEED ELPLIRRWLD EAGVRWGRDE QSRLKQGVPA FEQNSWAFGI KRLILGYALR DDAPLYQSSP QGMHYLTVAG VEGQSAQALG KLLNFIEVLD ETTQVLAKAQ APSLRLLELT ELLNAFYAPD EDEREQLQEI RDAIAALEQE LLAASPADMG AQANDLDLSI EVLALWFNQR LTESRVGQRY LAGSVNFCTL MPMRSIPFKV VCLLGMNDGV YPRVQHPVGF DLMAHLGARK GDRSRRLDDR YLYLEALLSA REQLYISYIG RSERDNSERI PSMLVSELIE YCQLCYLPES LAAEASNVSN EVAQQALLEA IVSHQPLQPF DPKLYQAALP QALTSHGIKQ SYSQQWCPPD SNSQLQHGRF IEAHTQIVLE DDAIGDSVQD IEPLGEAEHV DISAFIRFFR NPAQYFFNRT LKVDLNLNIQ ADDNDEPFSL NALERYLLQA QLLGDALEQG QNEPSTELLQ RLKASGNLPM QPFDDLLLRQ YSHDIAPLIG RTLFMRGDVA PRHADIRLSF ELPHQNSGTQ LKAKRVILEG RIDDISPKGL VTCRPGSAHG RDILALYLRH LCLMAAGVAQ PSYLQPSYLL DMGHFHALAP ITPALAHAQL ANLLKYFYQG QIHPLCFMPR TSLAYASAEA HEAQDSHTST DPHKARLEAA QSEWLDEQGE LGEGTDPHYQ RLFHFPDDFT EAHFGKLADD IYRPMLSLYH KDTLAQLEEF ALNEAQTATT EGAH
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