Gene Shewana3_2232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2232 
Symbol 
ID4478628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2684707 
End bp2685117 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content51% 
IMG OID639726827 
Productlactoylglutathione lyase 
Protein accessionYP_869867 
Protein GI117920675 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID[TIGR00068] lactoylglutathione lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00348977 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.524619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAC TGTTACACAC CATGCTTCGC GTCGGTAACT TAGAACGCAG TATCGCTTTT 
TACACTCAAG TGCTGGGTAT GAAGCTGCTC CGCACCTCAG AAAACCCAGA GTACAAATAT
TCCCTCGCCT TCGTGGGTTT CGGTGAAGAA TCAACGGGCC AGGCCGTCAT CGAGTTGACC
TACAACTGGG GAACGGAAAA ATACGATCTC GGCACGGCCT TTGGTCATAT TGCCATCGGT
GATGAAGACA TTTATGCCCG CTGCGAAGCC ATTGCCGCTG CGGGTGGTAA AGTGACTCGC
GCACCCGGCC CTGTTGCTGG TGGCACCACT GAAATCGCCT TTGTGGAAGA CCCCGACGGT
TATAAGATTG AATTTATTCA AATGAAATCG GCGACCCAAG GTTTAGGTTA A
 
Protein sequence
MSQLLHTMLR VGNLERSIAF YTQVLGMKLL RTSENPEYKY SLAFVGFGEE STGQAVIELT 
YNWGTEKYDL GTAFGHIAIG DEDIYARCEA IAAAGGKVTR APGPVAGGTT EIAFVEDPDG
YKIEFIQMKS ATQGLG