Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2230 |
Symbol | |
ID | 4478626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2682292 |
End bp | 2682753 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639726825 |
Product | MarR family transcriptional regulator |
Protein accession | YP_869865 |
Protein GI | 117920673 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00353505 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.420745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGTTG CACACCCGCA TGATGCTTTA TCAGCCGCGT CCGCCCATTC TACGGATCAG GCCCTGAACC ATGTGATTAT TGAGTTTTAT GAAAAATTAT CATCGTGGGA GCATGCTATT GTGCGCGATA AGGGTTTTAG CTTATCGCAG GTACACACAA TAGAGTTGTT GGGTGTGCAC GGCGCGATGC GAATGAAGGA ACTGGCCGAC AAAATCGGCG TGACCACAGG CACGCTCACG GTACAAATCG ATAAAATGGT CGAATCCCAG TGGGTGATGC GTCGTCCCCA TGAGAGTGAC AGACGCTCGA TTCTGGTCGA GCTCACCGAG AAAGGTCAGG CGCTGTTCCT TGAGCATGAT GCGCTGCATT TGCAATTAAC GACCGATCTC ACCGCTAAGA TGAGTGCAGA GGAGCGAAGC TTACTGCTGA GTTTGCTGAC GCGGATGAAC CAAGAGTTTT AA
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Protein sequence | MTVAHPHDAL SAASAHSTDQ ALNHVIIEFY EKLSSWEHAI VRDKGFSLSQ VHTIELLGVH GAMRMKELAD KIGVTTGTLT VQIDKMVESQ WVMRRPHESD RRSILVELTE KGQALFLEHD ALHLQLTTDL TAKMSAEERS LLLSLLTRMN QEF
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