Gene Shewana3_2226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2226 
Symbol 
ID4478622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2676208 
End bp2676642 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content49% 
IMG OID639726821 
ProductMarR family transcriptional regulator 
Protein accessionYP_869861 
Protein GI117920669 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.971671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT CATCAAATAC CCTAGGCGCA CTCTTAAGTG ATATTACCCG CATGATGCGC 
CGTGTGTTCC AAGAAACCTA CAGGCCCACG GCGGATTGCT CACTGACGTT ATCGCAGGCA
AGAGCCTTAT TGCATATCGC CCGTAATGAA GGCCTTAAGC AGATTGAGCT GGCGGATCGC
CTCGAAATTA AACCTATCAC GGCCGCGAGA TTAATCGATG TGCTGTGTGA TGCTGGGCTG
GTTGAACGCA GACCCGATGC CAAAGACAGA CGCGCTTTTC AGTTATTTTT GACGGAGGCG
GCCGCGCCCC ATTTAGCCGA AATTGAACGT GCCGTGACCA TAGTGTACAC CCAAGCCTTT
AAAGGATTCG ATGAAGCCGA GTCAGAGACT GTTATCCGGC TGTTATCGCA AATCCATAAA
AATTTTTCAG CTTAA
 
Protein sequence
MKTSSNTLGA LLSDITRMMR RVFQETYRPT ADCSLTLSQA RALLHIARNE GLKQIELADR 
LEIKPITAAR LIDVLCDAGL VERRPDAKDR RAFQLFLTEA AAPHLAEIER AVTIVYTQAF
KGFDEAESET VIRLLSQIHK NFSA