| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2225 |
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| Symbol | |
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| ID | 4478621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2675095 |
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| End bp | 2676150 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639726820 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_869860 |
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| Protein GI | 117920668 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.670197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG CAAATCCTCA AGCACCTAAA GCGAATACGC GTAAAAAGCG CGGCATATTA
CTGATTGTGG TGCCGCTGTT ATCCGTGCTG GCCATAGGTG CGGTTTACCT GCATGGCGGC
CGTTATATGG AAACCGATAA CGCCTATGTA AAGGCGGATA AAGTGCCCGT AAGCGCGCAA
GTGGCTGGGA ATGTCGACAG CTTGTATGTG GTTGAAAACC AAAGGGTTGA GAAGGGGAAA
GTGTTGTTTC GCCTCGACGA TGCCATGTTT AAGGTGATGG TCGATAAGGC GAGTGCCAAA
TTGGCACAGG TCAAGACGGA TTTAGCGGTA CTCAAGGCGA GTTACCATGA GAAGCAAGCC
GAAATCACTC TGGCAGAGAC CAAGTTAGCC TTTGCGGAGA AAGAGCAAAA GCGGCAGGAG
AATTTGATCG GTAAACACTT TGTGTCTGAA TCTCAGCTTG AAGATGCAAG GCAAAATACC
GATATTGCGC GGCAGAATAT TCAGACCCTG CAAAAAGACT TACACCGCAT CGCCGAAAGC
TTAGGCGGCA GCCCCGATTT TCCGATTGAA CAACATCCCA GCTATTTAGA AGCCTTAGCC
CAATTAAATG AAGCCAAGCT TGATTTAAGC CGCGTGGAGA TTAAAGCCCC AGTATCAGGC
GTCGTCAGCC AACTGCCAAA GCTAGGACAA TATGTGAATG TTGGCGCCAT TGCCCTCGCG
CTGGTAGCCG ATCATGCCCT CTGGATTGAG GCGAACTTCA CCGAAACCGA TTTAACCCAC
GTCAAACCCG GGCAAAAGGT CAATATCCAT ATCGATACCT TTCCCGATAA TCACTGGCAA
GGTACGGTCG AGAGTTTAAG TCCCGCAACG GGTGCAGAGT TCTCGCTGAT CCCCGCGCAA
AATGCAACCG GCAACTGGGT GAAAATCGCC CAGCGCGTTC CGGTGCGAAT TGCCATTGAT
ACCGCGCTGC CCGAGGCGCC GCTGCGCGCC GGATTAAGCG CCGTGGTGGA TATCGATACT
GAATATCAAC GTCAGTTGTT GGGTTTTAGT CTGTGA
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| Protein sequence | MSDANPQAPK ANTRKKRGIL LIVVPLLSVL AIGAVYLHGG RYMETDNAYV KADKVPVSAQ
VAGNVDSLYV VENQRVEKGK VLFRLDDAMF KVMVDKASAK LAQVKTDLAV LKASYHEKQA
EITLAETKLA FAEKEQKRQE NLIGKHFVSE SQLEDARQNT DIARQNIQTL QKDLHRIAES
LGGSPDFPIE QHPSYLEALA QLNEAKLDLS RVEIKAPVSG VVSQLPKLGQ YVNVGAIALA
LVADHALWIE ANFTETDLTH VKPGQKVNIH IDTFPDNHWQ GTVESLSPAT GAEFSLIPAQ
NATGNWVKIA QRVPVRIAID TALPEAPLRA GLSAVVDIDT EYQRQLLGFS L
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