| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2224 |
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| Symbol | |
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| ID | 4478620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2673518 |
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| End bp | 2675098 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726819 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_869859 |
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| Protein GI | 117920667 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.264069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.72348 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCAGC AAGTGATGGC AGGGCAAGAC CATGCCCAAG CTGAGGCCGT TAACGCGAGC
GGTGCTTTGC AAACCGATAC CAAAAAGCAC GAGCAACATC TTGGGTTTAT CACGCTTTCG
GTGATGCTAG CGACCATTAT GCAGGCGCTG GATACAACGA TTGCCAACGT GGCCTTGCCC
CATATGCAGG GCAGCATGGG GGCGACTCAG GATCAGATCT CTTGGGTGTT AACCTCCTAT
ATTGTGGCCG CGGCGATTTT TATGCCGCTG ACGGGTTTTT TAACCGCCAG GATTGGGCGT
AAACGGGTAT TTATGTGGGC AGTGGTGGGC TTTACGATTG CCTCTATGCT GTGCGGTGCG
GCGCAAAACC TTGAGCAAAT TGTGTTATTT CGCTTATTGC AAGGGGTGTT TGGTGCCAGT
TTAGTGCCTT TATCCCAATC GGTATTACTC GACAGTTACC CGCCAGAGCG CCATGGTTCG
GCCATGGCCC TTTGGGGTGT TGGTGTGATG GTCGGGCCGA TTTTGGGACC ATCCCTCGGT
GGTTGGTTAA CTGAGTATTA CAACTGGCGC TGGGTGTTCT ATATCAACCT GCCTTTTGGG
CTATTGGCTT GGTTTGGTCT TGCCGCCTAT GTGAAAGAAA CGCCGCTGGA CCATAGCCGC
AAGTTCGATT TACTCGGTTT TGCCATGTTG AGTCTGGCCA TTGGCGCCCT GCAAATGTTG
CTCGATAGGG GAGAATCCCT CGATTGGTTT TCCAGTCGTG AAATCGTTAT CGAAGCCATA
ATTGCTGGCA TGGCGTTTTA TCTGTTTATT GCCCATATCT TTACCCATAA ACATCCCTTT
ATTGAGCCTG GGCTGTTTAA GGACAGAAAC TTCAGTGTCG GGCTTATCTT CATTTTTATC
ATCGGGATTA TTCTGCTGGC GACCATGGCC TTATTGCCGC CTTTTATGCA GACCCTGTTA
GGTTATCCTG TGATTGATGT GGGTTACTTG CTGGCGCCAA GGGGCGTCGG CACTATGATC
GCCATGATGA CTGTGGGTAA GCTCGCCGGC AAAGTGGATG TACGTTACCA AATCTTTTTA
GGTTTGATGC TCACCATTTT GTCCCTATGG GAGATGACGG GCTTTAACAC CAATATTACC
GGCTGGGATA TAGTGCGAAC TGGGGTTATC CAAGGCCTTG GCTTGGGCTT TATCTTTGTG
CCACTCTCGA CCATTACCTT TGCAACCTTA GCGGCAAAAT ACCGTAATGA GGGGACTGCG
CTCTTTAGTC TGATGCGAAA TATCGGCAGC AGTATAGGGA TCTCCGTGGT GATCACCTAT
CTTGCCCAGC ACACACAGAT GAATCATGCG GCGTTTGCCG ATTACATTCA TCCCTTTAGT
TTTGCGCTCA AGCACGCCGT TGATCTTCAT GCCGTTGATT TATCGACGAC ACAGGGCATA
GCCTTACTCA ATGCCGAAGT GAATCGTCAG GCGGCGACCT TGGCCTATTT GCAGGACTTT
AGGTTAATGA TGTGGGTGAC GTTATCCGCC GTGCCCTTAG TGTTTCTGCT TAAAGGCGTG
CATAAAAAAC CAAAGCCATA G
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| Protein sequence | MSQQVMAGQD HAQAEAVNAS GALQTDTKKH EQHLGFITLS VMLATIMQAL DTTIANVALP
HMQGSMGATQ DQISWVLTSY IVAAAIFMPL TGFLTARIGR KRVFMWAVVG FTIASMLCGA
AQNLEQIVLF RLLQGVFGAS LVPLSQSVLL DSYPPERHGS AMALWGVGVM VGPILGPSLG
GWLTEYYNWR WVFYINLPFG LLAWFGLAAY VKETPLDHSR KFDLLGFAML SLAIGALQML
LDRGESLDWF SSREIVIEAI IAGMAFYLFI AHIFTHKHPF IEPGLFKDRN FSVGLIFIFI
IGIILLATMA LLPPFMQTLL GYPVIDVGYL LAPRGVGTMI AMMTVGKLAG KVDVRYQIFL
GLMLTILSLW EMTGFNTNIT GWDIVRTGVI QGLGLGFIFV PLSTITFATL AAKYRNEGTA
LFSLMRNIGS SIGISVVITY LAQHTQMNHA AFADYIHPFS FALKHAVDLH AVDLSTTQGI
ALLNAEVNRQ AATLAYLQDF RLMMWVTLSA VPLVFLLKGV HKKPKP
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