| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2214 |
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| Symbol | |
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| ID | 4478610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2660806 |
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| End bp | 2661426 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639726809 |
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| Product | chemoreceptor glutamine deamidase CheD |
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| Protein accession | YP_869849 |
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| Protein GI | 117920657 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.985834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCAAAAC CGAATATTGA GTACCCTGTT ATCGAGCCGA ATCGGTATTT TGACCATCAT
TTTGGCTGTG ACGCCGTAAA AATTCTACCA GGAGAATTCT ACGCCACACG GGATCAAACC
ATGATAGTCA CAGTGTTAGG CTCATGCATT TCAGTATGCC TCTATGATCC TGACTTAAGA
ATTGGGGGAA TGAACCATTT TTTATTACCG AGCGATAATG GCAACAGTTC TGGGATATTA
ACCGATTCGG CCCGCTACGG TGTATACGCC ATGGAGTTGC TGATTAACGA GTTGCTCAAA
CTCGGTGCGC GGCGCCGCGC CTTGGTCGCT AAAGTGTTTG GTGGCGGCAA CATGCTCAAC
GGGATCACCG CCCATAATAT TGGGGAGCGC AATGCGGAGT TTGTGCTCGA GTATTTGCAG
GTGGAGCAAA TTCCAATATT GGCAGCGGAT TTACTCGATT TTTATCCTCG AAAAGTATAT
TTCTTCCCCG GGACGGGATT AGTCAAAGTA CGAAAAATCA AAACGATGCA TAACAGCACC
ATTATGGACA GGGAAAGTGA ATATCGCCTA CGGATCAGGA ATTTGCCCAG TGGCGGAGAT
GTAGAATTTT TTGGTGACTA A
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| Protein sequence | MPKPNIEYPV IEPNRYFDHH FGCDAVKILP GEFYATRDQT MIVTVLGSCI SVCLYDPDLR
IGGMNHFLLP SDNGNSSGIL TDSARYGVYA MELLINELLK LGARRRALVA KVFGGGNMLN
GITAHNIGER NAEFVLEYLQ VEQIPILAAD LLDFYPRKVY FFPGTGLVKV RKIKTMHNST
IMDRESEYRL RIRNLPSGGD VEFFGD
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