| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2207 |
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| Symbol | |
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| ID | 4478603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2649216 |
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| End bp | 2652050 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639726802 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_869842 |
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| Protein GI | 117920650 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCTC GTACCCCACC ATTACGACAA GAGTTACAAC AAGGCTCCCA AGCGCCGCAA
AAGCAGCACG CCATTCCTAA AACCCGATTG GCTGCACGTC TGTCGGCAAT AAGCTTAGCC
ATGATGGTCG CAGGCTTTAG CACTAGCGCC CTTGCCGTTG GTAAGCTTGA AGGGCAAATT
CGCGATAATG TCAGTCAACA ACCCCTTGCT GGCGCGACCG TCACCTTAAA AGAGCTCAAC
CTGAGTCAAC AGGCAGGCCG CGATGGCCGC TTCTTCTTTG TCGGCGTGCA AGATGGCGAT
TACACCTTAG TAGTCAACTA CCTCGGTGCT ATGCCGCTGG AACATAGCGT TAGCATTCGC
GATAAACAAA CCACGCTGCA AGATATCAAC TTAAGCAGCC AAGATGTCGA GCATATTCGT
GTCGTCGGCC AACAAGGCGC ATTAAGTAAA TCCATGAACC GCCAACGCGG CGCCGACAAT
GTACTGAGTG TGGTCAGCGC CGATGTGCTG GGGAATTTCC CCGACAGCAA TATCAGTGAG
TCGCTGCAGC GGGTGCCAGG GCTATCTATC GAGCGAGATC AGGGCGAAGG TCGTTTTGTG
CGTGTACGCG GTATGGCGCC GGACTATAAC TCAGTGTCGA TGAACGGCAC GCGCTTGCCG
TCACCCGAGA GCGATCGCCG TGCGGTTGCC CTCGATGTAG TGCCATCGGA TCTCTTGCAG
TCGGTAGAAG TGAGTAAAAC TCTAACGCCG GATATGGATG CCGATGCACT GGGTGGCGCC
ATTGAGGTTA AAAGTCTGTC GGCCTTCGAT CGCGATGATA CTTATCTCAA CCTCAACGCC
GAGGCGAGCC AAGATACCTT AACCGACAAT ACCAATCCCA AACTCGCCGC CAGCTACAGC
GATATCTTTG CCGACAAGCT AGGGGTAGCC ATAGGTGCCA GTTGGTATAA CCGCGACTTT
GGCTCAGATA ACGTCGAAAC CGGCGGTAAA TGGGAATTTG CCGGGGATAA CGGCTTGGAA
GATGCGGCGC TTGAATCCAT CGACGCGCGG GATTATGAAA TCAATCGGGA ACGTTTAGGC
ATAGGCGTGA ACTTCGATTA TCGCCCAAGT GATGATACCG ATCTGTATCT GCGCACCCTT
TACAGTGAGT TTGATGATAC CGAAACCCGT AACAGCGCCA AAACTAAGTG GAAATCGCCG
CAGCAAGCCA ATGCCCTCAG CCAAGGCAAA ACCACTCGCT CGCTAAAATC ACGCACCGAG
AACCAGAACA TCACCTCCTT TGTACTGGGC GGTCAAACCC GCTTCGAACG CTGGACCTTC
GACTATCAAG CGAGCCACAG CACCGCCAGC GCCGAAAAAC CGCGGGATAT CGCTGGCGCC
GACTTTGTCG CCAAGATTGA TAACACGGGC TTTAGCAATA CCAAACAGCC ACAGATTATC
GCCCCCGAAG ACTACTTTCA AAACGCTAAC TTTGAGCTAG ATGAGATTGA AATTGCCGCC
TCCAAGGCCG AAGACACCAT CAACAGTGGC CAACTGGATC TCACCCGCCA GTTAACCCTC
GCGGATTACA GTGTCGAGCT AAAAACCGGG GTCAAGCTGA GTCGCCGCGA TAAATCCAAT
CGCGAAGATA TCTGGATCTA CAGCGACTTA GGCGATCAAG GCGTGAGCGA TGACGATTTG
CTATTGAGTC AGTATGCGGG CAATGAGCTT GACTATGACC TCGGTCGCTT TGGCAGCGGG
ATCAATGCTG CGCCGTTATG GCAGCTTATC GATAGCCTCG ATGCCGACAG CAATCGCGAT
GATATCGAGT CCACCATTAA CGATTTTGAT ATCAGCGAAG ATATCAACGC CGCCTACCTG
ATGGGCCACA TCGATATCGA TAAACTGCGT ATCTTAACTG GGCTGCGTTT CGAGCAAAAT
CAATGGGATT CCAGTGGCTA TGGTTATGAT GGTGCCAAGG GCGAATTTAT CGACATCAAG
CACTCCCGCG ATGAGGATCA TTGGCTGCCC GCACTGCACC TCACTTACCG CTATAGCGAC
AATACCGTGC TGCGCGCTGC CTGGACCAAC ACCTTAGTCC GCCCGACGTT CGGCCAATTA
GCGCCGGGAT ATTTGCTCGA AGAGGATGAT GGCGATATCG ATTTAACCTT TGGCAATCCA
CAGCTGAAGT CGCTCGAATC GATGAATTTT GACTTAAGCC TAGAGCACTA CTTCGGCAAT
ATCGGCTTAA TTTCGGCGGG GTTGTTTTAC AAAGATATCG ACAACTTTAT TTATCAGGCG
GATTTAGCTG GCCGTGGCGA TTATGTGGAT GCCCATAGCG CCGTGACCTT CGTCAATGGC
GACAGCGCCG ACATCTACGG CGTGGAACTC AGCTATGTGC AAGAGTTTAA CTTTTTGCCC
GAGCCCTTTA ATGCACTGGT GCTCAACTCT AACCTTACCT ACACGGATTC CAGCGCCAAG
ATCAGTTGGC TGGAGGATGG CCAGTTACTG AGCCGCGATA TTCCGATGCC AAGTCAATCG
GATCTCACCG CTAACCTATC ACTTGGCTAT GAAAACAGTT ACGCCAGTGT CTGGTTATCG
GCGGCCTATA AATCCGAATA TTTACAGGAA GTCACTGAGC TCAGTGATGA GCGCTACGAT
CTCTATCAAG ACAATCACTT GCAGTGGGAT TTTGTCGCCA AGGCCCATTT AACCAGCAAT
TTAACCTTGT ATTTCAAAGG GGTGAATCTG ACCGACGAGC CCTACTACAG CTACACGGGT
GACAGTGCTT ACAACGCCCA ATACGAAGCC TATGGCCGCA CTTTCCAGTT AGGCGTGCAG
TACACCAACT ATTAA
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| Protein sequence | MQSRTPPLRQ ELQQGSQAPQ KQHAIPKTRL AARLSAISLA MMVAGFSTSA LAVGKLEGQI
RDNVSQQPLA GATVTLKELN LSQQAGRDGR FFFVGVQDGD YTLVVNYLGA MPLEHSVSIR
DKQTTLQDIN LSSQDVEHIR VVGQQGALSK SMNRQRGADN VLSVVSADVL GNFPDSNISE
SLQRVPGLSI ERDQGEGRFV RVRGMAPDYN SVSMNGTRLP SPESDRRAVA LDVVPSDLLQ
SVEVSKTLTP DMDADALGGA IEVKSLSAFD RDDTYLNLNA EASQDTLTDN TNPKLAASYS
DIFADKLGVA IGASWYNRDF GSDNVETGGK WEFAGDNGLE DAALESIDAR DYEINRERLG
IGVNFDYRPS DDTDLYLRTL YSEFDDTETR NSAKTKWKSP QQANALSQGK TTRSLKSRTE
NQNITSFVLG GQTRFERWTF DYQASHSTAS AEKPRDIAGA DFVAKIDNTG FSNTKQPQII
APEDYFQNAN FELDEIEIAA SKAEDTINSG QLDLTRQLTL ADYSVELKTG VKLSRRDKSN
REDIWIYSDL GDQGVSDDDL LLSQYAGNEL DYDLGRFGSG INAAPLWQLI DSLDADSNRD
DIESTINDFD ISEDINAAYL MGHIDIDKLR ILTGLRFEQN QWDSSGYGYD GAKGEFIDIK
HSRDEDHWLP ALHLTYRYSD NTVLRAAWTN TLVRPTFGQL APGYLLEEDD GDIDLTFGNP
QLKSLESMNF DLSLEHYFGN IGLISAGLFY KDIDNFIYQA DLAGRGDYVD AHSAVTFVNG
DSADIYGVEL SYVQEFNFLP EPFNALVLNS NLTYTDSSAK ISWLEDGQLL SRDIPMPSQS
DLTANLSLGY ENSYASVWLS AAYKSEYLQE VTELSDERYD LYQDNHLQWD FVAKAHLTSN
LTLYFKGVNL TDEPYYSYTG DSAYNAQYEA YGRTFQLGVQ YTNY
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