Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2204 |
Symbol | |
ID | 4478600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2644839 |
End bp | 2646047 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639726799 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_869839 |
Protein GI | 117920647 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAT TTAATCAAAA CCCGCAAGAC CGCAAATGGG ATTATACCTT TGCGTACTCA CTCCTATTAC TTATTCCCTT CGATTTACTC GCTTCTCTTG GCATGGATCT GTATCTGCCT GCCATCAATG ATATTCGCCA GAGTTTTAGT GTTAGCCAAG GTCAAATGCA GCTGACTTTA ACCCTCTATA TGGCGATTTT AGGCTTAGGC CAGTTGCTAT TTGGACCGCT ATCCGACGCA ATAGGGCGCA GGCGAGTGGT GATTGCCGGA GCCTTAGTTT ACGCAGGTTC CAGTTTGGCG ATGGCATTGA CCGACAGCTT CAGTGTGTTT CTGCTCCTTC GGATTGTCCA GGCACTGAGC GCCTCGGCCG TGCTAGTGGC GGCATTTGCG ACAGTGCGAG ATGTGTTTGC CGATAGGGAA GAAGGCGTCG TTATCTATGC CATTATGGGC TCAGTGCTCG CGGCCGTGCC TGTGGTAGCA CCTTTTATTG GCTCGCTTAT CGATGGGCTT TGGCATTGGC GAGGGATCTT CTACACCTTA GCGATATTTG CTGCCCTAGT AGGCTTGCAT GCCTTACTGA AATGGCCTGA AACCCGCCCA GCGCAGACCC ATCCCTTTGA GTGGTCGAGA TGTTTTAACA TCATTCGCGC TAAGGCGTTT TTAGGCTATA CCTTGGCCTA CGCCACGGCC ATGGGGGCCT TCTTTGTCTA TTTTTCGGCA TCACCGAGCA TACTGATGGA CAAATTAGGA CTCGATAAGG TGACCTTTAG CCTGTGGTTT GGCTCGGTTG CGATAGTCAT GATAATCACC ACCCGCTTTG TTAAGCATCT TGTCAAACGT TGGGGCACAC AGGGAACTGT GCTAAGAGGC TTGATTGGCA TGATGCTAAG TAGCGGCTTA TTGTATGGGC TGGAATGGCT AAATGGGCTG AGTTTACTTG GCTTTATGCT GCCTATGTAT TTCATCGGAG TGCATATCGC CTTAACCTGC GCCGTAACCG CTAATGGTGC CTTAGCGGCG TTTTCCCATT CTGCGGGGCT GGCAACCGCT CTGTATTATG CCATTGAGAG TCTGTTCTTA AGTGCCTTAG TCAGTCTGTT GATTTGGCTG TTGCCCTCGG GTACTACGCT GGTGATCTGT AGTTATATTT TGATCTCGGC GTCACTATCA CTGCTATTTA TTCTCTCCAT TAGAGCAGAT AACAAATAG
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Protein sequence | MTKFNQNPQD RKWDYTFAYS LLLLIPFDLL ASLGMDLYLP AINDIRQSFS VSQGQMQLTL TLYMAILGLG QLLFGPLSDA IGRRRVVIAG ALVYAGSSLA MALTDSFSVF LLLRIVQALS ASAVLVAAFA TVRDVFADRE EGVVIYAIMG SVLAAVPVVA PFIGSLIDGL WHWRGIFYTL AIFAALVGLH ALLKWPETRP AQTHPFEWSR CFNIIRAKAF LGYTLAYATA MGAFFVYFSA SPSILMDKLG LDKVTFSLWF GSVAIVMIIT TRFVKHLVKR WGTQGTVLRG LIGMMLSSGL LYGLEWLNGL SLLGFMLPMY FIGVHIALTC AVTANGALAA FSHSAGLATA LYYAIESLFL SALVSLLIWL LPSGTTLVIC SYILISASLS LLFILSIRAD NK
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