Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2191 |
Symbol | |
ID | 4478587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2631322 |
End bp | 2632935 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639726786 |
Product | IS4 family transposase |
Protein accession | YP_869826 |
Protein GI | 117920634 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5421] Transposase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.694386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGCTC CCGCTATCTC TATCCGTAAC CTCGACCACC TTGGTTTGGT CGCTGCACTT TGCCAAGAAC TCGGCATTGC TCGCATGATT GATGCGGTGC TACCCAAAAC GCCGCCCTAC AAAGTCTCAC ATGGTGAAGC GTTGGTGGCG ATGATACTGA ACGGTCTTGG CTTTCATAGT TCGACCTTGC ACATGTTCCC GCAATTCTTT GCCAACAAGC CTGTAGAACG CCTGATTGGC CCGGGGATCT GTGCCGATGA CCTCAATGAT GATGTGCTCG GCCGCTGCCT TGATGCCCTC TTTGAGGCCG ATGTCAGCAC GCTTTATCAG GTGATGGCGG AGCAGGTCGT TGAACGATTG GGGCTCAAAA GTACTGCAGT ACACCTCGAT ATCACCAGCT TCCACGTCGA TGGCGCCTAT GACCAAGCCG ATGGCGAGCA GCTCGGTAAG TTGCAATTGG TACGGGGCTA TAGCCGCGAC CATCGGCCAG AGCTAAACCA GGTTATCCTG GAGCTTATCT GTGAAAATCA GGCCGGCCTG CCCATCTACA TGCAAGCCTT GAGTGGTAAT ATTAATGATA CCAAGGCCTT TGCCCAGACG GTACGGCGCC ACTTGAGCAG TCTCAAGGCC GCGCAGGAGA GTCGTTATCT GGTCGGCGAT GCGGCGCTGT ATTGCGCCGA CACCTTGCAA CTACTGGCAC AACAGCAACA GTTGTTCGTG ACTCGTGTGC CTGTCACCCT CAATGAAGCC AAGCGAGCCG TGGCAACCAT TGGCACCCAG TCGCTGGTTG CGCTGGGCAA TGGCTATCAT GGCTGTTGGC AAAGCGCCAA TTATGCCGAC GTCGCGCAGC GTTGGTTGCT GGTGCGCAGC GAACAGGCCA GCCACCGTGA GCAGCAAACA TTAGCCAAAA ACCTACTGAA AGACAGCACG CGTGAACTGA AAGCCTTCAA CAAATTATGT GCCCAGCGTT TTGCCTGCGA GACCGATGCG CAGGCTGAAT TAGCCCGTTT TGCTGTCAGC TTAAATCTGC TGCAACTAGA AGCAGAAGTC GTGAGTGAAC CTATCTATGC AGGGCGCGGA AGGCCCCAAA AGGGTGAAAT GCCGGTGAAC TACCAATTTC ACATCAAGGG GTTAGCCGCA AGTAGCTTGG CGCGGGTGGC TGAGGCGCGC AACCAGACAG GGGTGTTCAT CCTCGCGACC AATGATCACA GTGAAACGCT CACCATGGCT GAGCTGTTGG CTACCTATAA AGCCCAGCAG AATGTCGAGC GTGGTTTTAG GTTTCTGAAA AGTCCCGAAT TTTTAACCTC CTCGTTATAT CTTAAAAAAC CGGAACGTAT CGAAGCGTTG CTGATGGTGA TGACCTGTAG CCTGATGATT TATGCGGCGC TGGAGCACCG GATCCGGCAG GGCTTAGTAG AGCAGAACCG GAGTGTGGCG GACATGAAAA AGAAACCCAC GCAAAAACCG ACTGCGCGGT GGATTTTTTT ACGCTTTGGC GGGGTGCACG AGTACCAGTT GGGAGAGGCG CCACCTCAAG TCACAGGACT CACAGTGGAC CAGCAGATCA TTCTCGACGT GTTAGGCGAA CGGTATCGGC AAATTTATTC CTAA
|
Protein sequence | MAAPAISIRN LDHLGLVAAL CQELGIARMI DAVLPKTPPY KVSHGEALVA MILNGLGFHS STLHMFPQFF ANKPVERLIG PGICADDLND DVLGRCLDAL FEADVSTLYQ VMAEQVVERL GLKSTAVHLD ITSFHVDGAY DQADGEQLGK LQLVRGYSRD HRPELNQVIL ELICENQAGL PIYMQALSGN INDTKAFAQT VRRHLSSLKA AQESRYLVGD AALYCADTLQ LLAQQQQLFV TRVPVTLNEA KRAVATIGTQ SLVALGNGYH GCWQSANYAD VAQRWLLVRS EQASHREQQT LAKNLLKDST RELKAFNKLC AQRFACETDA QAELARFAVS LNLLQLEAEV VSEPIYAGRG RPQKGEMPVN YQFHIKGLAA SSLARVAEAR NQTGVFILAT NDHSETLTMA ELLATYKAQQ NVERGFRFLK SPEFLTSSLY LKKPERIEAL LMVMTCSLMI YAALEHRIRQ GLVEQNRSVA DMKKKPTQKP TARWIFLRFG GVHEYQLGEA PPQVTGLTVD QQIILDVLGE RYRQIYS
|
| |