| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2190 |
|---|
| Symbol | |
|---|
| ID | 4478586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 2630141 |
|---|
| End bp | 2631034 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639726785 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_869825 |
|---|
| Protein GI | 117920633 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2378] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.315226 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAA CTAAAGAACT TGATCCTGTT TTAGCTGAGC GATACAGGTT TATAGATTTC
CTACTGCTGT TCAAAGGTCA GCTAACTCGT GCAGAGCTGG TTAAACGATT CAGCATTGGT
GAAGCTACAG CAAGTAGAAC TATAGCCTCC TTTTTGGAAA AGTATCCTGA AGAGACGGAG
TATTTGGGGC CAAGGTATGG TTATAGAGCG AATCCATTCT ATCAACATAA ATATGAGCAT
AACGCAGTTA CAGGACTGCA ATACACAGCT TACGGCACTC TTACTCAAAT ACTAGATGTA
CAACGGTATG GAATAGTCAT CAATAAGTTT GCCAAGCAAC TTGATGTAGC TAATGTGGCG
CCTGTTTGTA GAGCTATAGT AAATAACGCT AGTTTGCACA TTCAGTATGC ATCTACAACC
TCTGGTATTA AAGATAGAGT GGTGACCCCC CATTCTATAT TTGAGGCCGG AGGGTTTTGG
TATTTCCGAG CATATGATAA GTCTGCATAT GAGTTTCGAA CGTTTAAACT CAGTCGAGTT
ATCAAAGTAT TCCAATTACA TCCTGACTCG TCCAACGATT ATTCCAAGGC TCGTGACGAT
AGTTGGAACC GTCAAAGAAT GGTAGAACTT ATGGCACATC CGAGAAATCC GATCCCAGAT
GCACAATTAT CTGATATAGG TATTAAAGAC GGTGAGCACC GATCAATCCT TGTTTCGGAG
GCTTTAATAG GTTTTGTACT TAATGATATG AGAGTGGATT GCTCTACAAG CCACAAACTC
AACTTTATAG AGTATCCGTT GGCTCTAAAA AATCGTACTG AACTACTTTC TGTTGAGTCT
ATGCAGTTTG CTCCTGGCTT TACATCGAGC ACTGATAATA GAAGCAGATT GTGA
|
|---|
| Protein sequence | MTTTKELDPV LAERYRFIDF LLLFKGQLTR AELVKRFSIG EATASRTIAS FLEKYPEETE
YLGPRYGYRA NPFYQHKYEH NAVTGLQYTA YGTLTQILDV QRYGIVINKF AKQLDVANVA
PVCRAIVNNA SLHIQYASTT SGIKDRVVTP HSIFEAGGFW YFRAYDKSAY EFRTFKLSRV
IKVFQLHPDS SNDYSKARDD SWNRQRMVEL MAHPRNPIPD AQLSDIGIKD GEHRSILVSE
ALIGFVLNDM RVDCSTSHKL NFIEYPLALK NRTELLSVES MQFAPGFTSS TDNRSRL
|
|---|
| |