Gene Shewana3_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2178 
Symbol 
ID4478382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2612819 
End bp2613241 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content41% 
IMG OID639726774 
Producthypothetical protein 
Protein accessionYP_869814 
Protein GI117920622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.925437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.93497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTTA AATCACTCGA AACTGAACAG CAAATTTCCA TACAAGCCCT CATTCGAAGC 
TGGGAAGGAA AATTAACCTG GGACTTGTTA GTCACAAAAA TTGAATCCAG TTTAGGTATT
GCCACCACGA GACAAACACT CGACAAGTAC GCCAATATCA AGCACGAATA CAAGCAAAAA
AAGCAAGTTT TAAGGGGTAA GCCCGTTTCG CCTGATAATA AGGAACTGAT TTCATATTTA
CAAAAAGACG TGGAATTAGC GGAGAAGCTG ATCCAACTCG AAGCACAGCT TGCAGTAGCA
CACTCTGAGA TAGGCAAACT TCAAGCTTTC ATTCAAAAGT TATCCAGCAT TAGCAAAACC
AACCCAAGTG TCATGGATGT GTTTCAAAAG ACCCTACGAG ACGTTGAAAG TAGCACTAAG
TAA
 
Protein sequence
MALKSLETEQ QISIQALIRS WEGKLTWDLL VTKIESSLGI ATTRQTLDKY ANIKHEYKQK 
KQVLRGKPVS PDNKELISYL QKDVELAEKL IQLEAQLAVA HSEIGKLQAF IQKLSSISKT
NPSVMDVFQK TLRDVESSTK