Gene Shewana3_2177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2177 
Symbol 
ID4478381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2610605 
End bp2612809 
Gene Length2205 bp 
Protein Length734 aa 
Translation table11 
GC content46% 
IMG OID639726773 
Producthypothetical protein 
Protein accessionYP_869813 
Protein GI117920621 
COG category[S] Function unknown 
COG ID[COG4688] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTGA CATTCACCGA CAGTGACAGT AGAACCATCA ATATTCTCTT TTGCAATCTG 
AATAAAAACT TTCCAAATAT AGGTACGCGT TTCACAGACG ATGACCGATT AGCGCCTGAA
ACACATGATT TATTGTTTGC CTATATGCTT GATGTATTGA AGGAAAACAT AACCATAAAT
AGAAGGCAAG ATAAAATCAC GACAGCAAGA TACTTCCTTT GCCGCTTGAA TGAGAATGTC
GCCTCTGCTT CCCTTGATAA AATTCAACAC GTCATCGACT CGCTGAAATA CTCTCGCCCC
CTAACGAATT TCATCAACTG GCTACACCAT CATAAAATGT TGCCCAAAAG CTGTCAGCCC
TACATAAATA CCACCACTGA AGCAGCTCGA AATAAAAGTG GTGATGATGC ACTGGCGGCG
GAGAAAGGCA AACTGCCTTC GGAAAAATCG CTGTTAGCGC TCGGCGCTAT CTTTCATGAT
GTCATCCCCC CCTATCTGGA TGATGACCAA AATGATATTG ATGCTTGGCA ACCGCTTATC
GCATCGACGC AAACGCAGCG AGACAGCTTT ATTTGCACCA TGGCAGCGCT AGGCATGGCG
TCACCTAATC GCATCGGTGC AGAGCAAGTG CTTCTGACTA CACAACGCAT ACAGCGCCAT
TCGCAAGTTG TCGATGGACA AGAAAAAACA GTGCATTATC TGAACTGGCG AGGCTCAAAG
GGCTTTAAGG ACAATCAAAA TCACATCAAT GCCGAAATGG TTGAGAGTCT AGACCGAGCC
TTGCACTTCA CCATCCTAGC GACAGAACCT GCCAGAGCCC TGGCTCGGTT CTATCGACAG
CCAAATCGCC CATTGAAAGA AGTGCTGGGT GATTTTAAGC CTAGCGATGA GAACATTGCC
CTGCTAAAGC CATCCATGAA CAAACCCACC CACCTTTTGC ATCTTGGCTT GCTGCTAGGC
TTTTTTGAAG GCAGTGACAA ATGTGTGCGA GTTACCCCTG ACACAAAAGG GGCAATCGAC
AAAACTTATA AACCGCATAA TCCAAAGTTC ATCAAACCCA TTGCCCAACT TGAGCCGTTC
GATACATTGG TATTTAAGCC TCGCTGCCCT TACGCTCGGG CGCTAACAGG ATCTAATTTT
GCAAAGCAAT GTCAATACCA AAATTATACT GCGGGTCAAC AAGCACTTAC CGTGGCCGCC
TTTCAAAATC ACACCATCGA GATAAATCAA TCTCAACTGA GTGGCTACAA TAAGCAGCAA
ACGAAGTCTG TAGATGTAGA GCACGCCTTG TTTATGTATA CAGAAAAGCA AATGGGCGGC
AAGGTAACAC ACCCTTTTCT TTTGGTGCCG ATTGGCTCGC TCAGTCGGAT CTTTGCTGAC
GATTTAAGTA AAGCCAGTAA AAACAGGCTG ACGATTTTTG AGCGACACGG CTTTGCCAGC
GATTTTGTGC TCAAGCCTCA CCAACTTCGC CACTGGCAAA ATGATTACCT TGCGAAAAAA
GGGCTACCTC ACCATCTCAT CACCCTGCTG TCCGGTCGAA AAAGCGCAGA GCAAACCCTG
ACGTATATCC ATACCACAGA TGCCGAGAAC GCCTCGGTGA TTTGGGATAT CTCTTACTCT
AATGAGCCAG AAAGGGACGT TAAAGAGAAA GTCAGTCTTC GTATTAGAAC CATGAACCAA
TACAATGAGG CTATCGACAA TGAAACGCCT ACTTTTGTCC ATGAAACAGG GTTTTGCACT
CAGAACCTCG CCCTATCACC TTGCACTTAC ATGTCAGAGT TTGAAACACA ATGTGCGCTG
TGCTCATCGT CGTGCCATAT CGCCCATGAT AGTGAGGCAA TTGCCTTGCT TATGAAGGAT
CTAAAAGTAC AGACGCATAA CTTGGAAAAG GTTCAGACTA CCATCAACTT TGTCACCAGT
CGAAGCATGC AGATGTGGTA CAAAACCCAT TATCGCAACA CGTGCATGCT AAAGCACCTC
ATTGAAGTGC TATCCGATGA CGCCATCGAA AAAGGCAGTA TGGTACGTTT ACTTACTCGT
TCAAATAGCA TAAGAATCAC CAGTTTAGAG ACAAAAACAG TGGCAGAACA CAAGTTAGCG
CTACCTGATG CCGAGCAAGC CCTTCAAGCC GCGCTTGAGG CAAAAAAAGC TAAAAGCCAA
GATGCAGCCA CGAATAATTT CTTAGGCTTT CTAGGTTCAC TCTAG
 
Protein sequence
MAVTFTDSDS RTINILFCNL NKNFPNIGTR FTDDDRLAPE THDLLFAYML DVLKENITIN 
RRQDKITTAR YFLCRLNENV ASASLDKIQH VIDSLKYSRP LTNFINWLHH HKMLPKSCQP
YINTTTEAAR NKSGDDALAA EKGKLPSEKS LLALGAIFHD VIPPYLDDDQ NDIDAWQPLI
ASTQTQRDSF ICTMAALGMA SPNRIGAEQV LLTTQRIQRH SQVVDGQEKT VHYLNWRGSK
GFKDNQNHIN AEMVESLDRA LHFTILATEP ARALARFYRQ PNRPLKEVLG DFKPSDENIA
LLKPSMNKPT HLLHLGLLLG FFEGSDKCVR VTPDTKGAID KTYKPHNPKF IKPIAQLEPF
DTLVFKPRCP YARALTGSNF AKQCQYQNYT AGQQALTVAA FQNHTIEINQ SQLSGYNKQQ
TKSVDVEHAL FMYTEKQMGG KVTHPFLLVP IGSLSRIFAD DLSKASKNRL TIFERHGFAS
DFVLKPHQLR HWQNDYLAKK GLPHHLITLL SGRKSAEQTL TYIHTTDAEN ASVIWDISYS
NEPERDVKEK VSLRIRTMNQ YNEAIDNETP TFVHETGFCT QNLALSPCTY MSEFETQCAL
CSSSCHIAHD SEAIALLMKD LKVQTHNLEK VQTTINFVTS RSMQMWYKTH YRNTCMLKHL
IEVLSDDAIE KGSMVRLLTR SNSIRITSLE TKTVAEHKLA LPDAEQALQA ALEAKKAKSQ
DAATNNFLGF LGSL