| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2168 |
|---|
| Symbol | |
|---|
| ID | 4478372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 2600670 |
|---|
| End bp | 2601248 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639726764 |
|---|
| Product | Na(+)-translocating NADH-quinone reductase subunit E |
|---|
| Protein accession | YP_869804 |
|---|
| Protein GI | 117920612 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
|---|
| TIGRFAM ID | [TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000821549 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAT ATCTCCTGTT GTTGATCAGC ACCGTACTGG TCAACAATTT CGTATTAGTG
AAATTCTTAG GTTTATGTCC TTTTATGGGG GTCTCCAGTA AATTGGAGTC CGCTATTGGC
ATGTCCATGG CGACCACCTT CGTGTTGACC TTGGCATCCA TTCTCAGTTA CCTCGTCAAC
CAATATCTAT TATTGCCTTT TGACCTCAGC TACTTGCGTA CCATGAGCTT TATTCTGGTC
ATTGCTGTGG TGGTGCAATT TACTGAGATG GTGGTGCAAA AAACCAGTGC CTCCCTACAC
CGAGCACTCG GGATCTATCT GCCATTGATC ACCACTAACT GTGCCGTACT GGGTGTGGCC
CTGTTAAACG TGAACGAGAA ACACGATTTT ATTCAGTCAG CTATCTATGG TTTTGGGGCT
GCGGTAGGTT TTTCCTTAGT GTTAATTCTG TTTTCCGCGA TGCGCGAACG TTTAGCGGCC
GCCGATGTGC CAATGCCGTT TAAGGGCGGC GCCATCGCCA TGATCACCGC AGGCTTAATG
TCTTTAGCCT TTATGGGATT CACAGGATTG GTTAAATAG
|
|---|
| Protein sequence | MSEYLLLLIS TVLVNNFVLV KFLGLCPFMG VSSKLESAIG MSMATTFVLT LASILSYLVN
QYLLLPFDLS YLRTMSFILV IAVVVQFTEM VVQKTSASLH RALGIYLPLI TTNCAVLGVA
LLNVNEKHDF IQSAIYGFGA AVGFSLVLIL FSAMRERLAA ADVPMPFKGG AIAMITAGLM
SLAFMGFTGL VK
|
|---|
| |