| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2166 |
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| Symbol | |
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| ID | 4478365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2594447 |
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| End bp | 2596468 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639726757 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_869802 |
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| Protein GI | 117920610 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000274119 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGAAT CTGTTTTTCA GCTTGAATCT CAATTTGCCC CCGCAGGGGA TCAGCCCACG
GCCATTGCCA AGTTGGTCGA TGGCTTAGAA TCGGGCCTAG CTTGCCAAAC CCTATTGGGG
GTAACGGGCT CGGGCAAGAC ATTCACTATC GCCAATGTGA TCGCCCAACT GGGGCGCCCA
ACCATTATTA TGGCGCCAAA CAAGACGCTG GCGGCGCAGC TTTATGGCGA GATGAAAGAG
TTTTTCCCCA ATAATGCGGT GGAATACTTT GTCTCCTATT ACGATTATTA CCAGCCAGAA
GCCTATGTGC CCGCATCGAA CACCTTTATT GAAAAGGATG CGTCGGTTAA CGCCCATATC
GAGCAAATGC GACTCTCGGC CACGAAAGCA CTGTTAGAGC GTAAGGATGT CGTCTTGATT
GCCTCTGTAT CGGCAATTTA CGGTCTGGGC GATCCCGATT CCTACATGAA GATGCTTTTG
CATCTACGCC AGGGCGATAC CATGGGGCAG CGGGATATTC TTAAGCGCTT GAGTGAGTTG
CAATATACTC GCAACGATCT CGAGTTGCAG CGCGGTACTT TCCGCGCCCG TGGTGAAGTT
ATCGATATTT TCCCCGCCGA TTCTGACCGC TACGGGATTC GAGTCGAACT CTTTGACGAT
GAAATTGAAC GCTTAAGCGA GTTTGACCCG TTAACGGGGC AAATTGTTAA ACGTATCGCG
CGCACCACTG TTTATCCGAA AACCCACTAT GTGACGCCGC GGGAAAAAAT TCTCGAAGCG
ACCGAGTCAA TTAAACAAGA GCTGCGCGAG CGTAAGCAGT ATCTGCTCGA CAACAATAAG
TTGATTGAAG CCCAGCGGAT CCATGAGCGG GTGCAATACG ATATTGAGAT GATGGTCGAG
CTGGGCTATT GCTCCGGTAT TGAAAACTAC TCCCGCTATC TGTCGGGTCG TGCACCGGGT
GAAGGTCCGC CAACTTTGCT CGATTATTTA CCCGCCGATG GTTTGTTGAT TATCGACGAG
TCCCACGTCA CTGTGCCGCA AATTGGCGCC ATGTATAAGG GTGACCGCTC CCGTAAAACC
ACGCTTGTGG AATATGGCTT CCGTTTACCC TCGGCGCTGG ATAACCGGCC ACTGAAGTTT
GAAGAGTTTG AGCAATTGAT GCCGCAGACC ATTTATGTGT CGGCAACACC AAACCCTTAC
GAACTGGATA AGAGTGGTGG CGAGATTGTT GAGCAAGTTG TTCGGCCAAC GGGTTTGCTC
GATCCCGAGT TAGAAGTGCG TCCGGTCAGC ATCCAAGTGG ACGATTTACT CTCCGAGGTC
GCCAAACGCG TCGCCGTTAA TGAGCGGGTG CTTGTCACCA CCTTAACCAA GCGCATGTCG
GAGGATTTAA CCGAATACCT CGATGAGCAC GGCGTCAAAG TCCGTTATTT GCATTCGGAT
ATCGATACCG TAGAGCGGGT GGAGATCATT CGCGATCTGC GCCTCGGTAA GTTTGATGTG
CTGGTCGGTA TCAACTTGCT GCGTGAAGGT TTAGACATGC CAGAAGTTTC CTTAGTCTGT
ATTCTCGATG CGGATAAGGA AGGCTTTTTA CGTTCGGAGC GTTCGCTTAT TCAGACCATA
GGCCGCGCCG CGCGTAACGT CAATGGCAAG GTTATCCTCT ATGCCGATAG GATCACCCAG
TCGATGGCCA AGGCGATGGG TGAAACCGAG CGTCGCCGCG AGAAACAACA CGCCTACAAC
CTTGAGCATG GCATAGTGCC AAAAGGCGTG GTCAAGCGCA TTACTGACGT GATGGATGTG
GACGATGGCA GAGATACTGA GAAGGGTTAT AGCCCATCGT CACTGGGTAA AGTGGCTGAA
CCTAAAGCCA AACGTTATCA AGCCGATGCG GCGCAGCTTA GCCATGATAT CGACAAGTTA
GAGAAGCAAA TGCATGAACA TGCGCGTAAC TTGGAGTTTG AACAGGCGGC AGCCCTACGT
GATGAGGTGA AACGTTTACG GGAGTTGCTG ATCACAGCCT AA
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| Protein sequence | MSESVFQLES QFAPAGDQPT AIAKLVDGLE SGLACQTLLG VTGSGKTFTI ANVIAQLGRP
TIIMAPNKTL AAQLYGEMKE FFPNNAVEYF VSYYDYYQPE AYVPASNTFI EKDASVNAHI
EQMRLSATKA LLERKDVVLI ASVSAIYGLG DPDSYMKMLL HLRQGDTMGQ RDILKRLSEL
QYTRNDLELQ RGTFRARGEV IDIFPADSDR YGIRVELFDD EIERLSEFDP LTGQIVKRIA
RTTVYPKTHY VTPREKILEA TESIKQELRE RKQYLLDNNK LIEAQRIHER VQYDIEMMVE
LGYCSGIENY SRYLSGRAPG EGPPTLLDYL PADGLLIIDE SHVTVPQIGA MYKGDRSRKT
TLVEYGFRLP SALDNRPLKF EEFEQLMPQT IYVSATPNPY ELDKSGGEIV EQVVRPTGLL
DPELEVRPVS IQVDDLLSEV AKRVAVNERV LVTTLTKRMS EDLTEYLDEH GVKVRYLHSD
IDTVERVEII RDLRLGKFDV LVGINLLREG LDMPEVSLVC ILDADKEGFL RSERSLIQTI
GRAARNVNGK VILYADRITQ SMAKAMGETE RRREKQHAYN LEHGIVPKGV VKRITDVMDV
DDGRDTEKGY SPSSLGKVAE PKAKRYQADA AQLSHDIDKL EKQMHEHARN LEFEQAAALR
DEVKRLRELL ITA
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