Gene Shewana3_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2164 
Symbol 
ID4478363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2592986 
End bp2593705 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content51% 
IMG OID639726755 
Productqueuosine biosynthesis protein QueC 
Protein accessionYP_869800 
Protein GI117920608 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0350269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAG CGTCAGTTTC AAAGGTGGTA GTGGTTTTCA GTGGCGGACA AGACTCAACG 
ACTTGTCTTA TTCAAGCCTT AACTCAGTTT GATGAAGTCC ACGGGATCAC CTTTGATTAT
GGTCAGCGTC ACCGTGAAGA AATTGAAGTT GCCAAATCCC TCGCCAAGCG CTTAAAGATC
ACTAGCCATA AAGTGATAGA TGTGAGCTTA CTCAATGAGT TAGCTATTTC TGCCCTCACC
CGCGATGCGA TCCCCGTGTC CCACGAATTA ATGGAAAATG GCTTACCCAA TACCTTTGTG
CCGGGCCGCA ATATCCTGTT TTTGACTTTG GCGGGGATCT ACGCCTACCA ACTAGGGGCA
GGGGCGATTA TTACCGGCGT GTGTGAAACC GATTTTTCCG GTTATCCCGA CTGTCGCCAC
GACTTTGTGC GCGCGATGGA ATCGGCACTG GTGCAAGGCA TGGACAAAAA GCTTGAGATC
ATCACGCCAT TAATGTGGCT CAATAAGGCT CAAACCTGGG CGCTGGCCGA TAAATACCAG
CAGCTCGATT TAGTTCGCCA CCATACCCTA ACCTGTTATA ACGGCATTGT CGGCGATGGT
TGCGGTGCTT GCCCAGCCTG CCATCTTCGC AAACGGGGCT TAGAGGATTA CCTGCAAAAT
AAAGCAGAGG TGATGGCCTC GCTGGACAAG GCAACTGCAA CGGGTAAACC ACAGGCGTGA
 
Protein sequence
MSAASVSKVV VVFSGGQDST TCLIQALTQF DEVHGITFDY GQRHREEIEV AKSLAKRLKI 
TSHKVIDVSL LNELAISALT RDAIPVSHEL MENGLPNTFV PGRNILFLTL AGIYAYQLGA
GAIITGVCET DFSGYPDCRH DFVRAMESAL VQGMDKKLEI ITPLMWLNKA QTWALADKYQ
QLDLVRHHTL TCYNGIVGDG CGACPACHLR KRGLEDYLQN KAEVMASLDK ATATGKPQA