Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2162 |
Symbol | |
ID | 4478358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2590896 |
End bp | 2591384 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639726750 |
Product | hypothetical protein |
Protein accession | YP_869798 |
Protein GI | 117920606 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00149059 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAATCG ATGTTCCTTT AATCAACGAA GCCCAAATTG GCTCCCGCTT AAATGCGGCA ATCGAACACA ACAGGCGAGG AGAGTTCGCC CTGTTGCTAT CGCTATTGTC TGCAGATGCG AGGGACATGG CGCAGTTTCA ATGGCAAAAA GAGCTCGATA ATGCAGAAAA ATTGCAACGT CAGTTTGAGT TACCCCCAAA GCAAGCGCTT CTAGCGGATT TATCGACGGA TAACAATGTT ACCGACAATA GTGCTGTTTT CGCCGAGCAA GGGGCGAGGG CGTTTCAACT GCAACAGGCA TTGCGCCCTG AAGCCTTAGT GATCCGCGGT GGCGAGCCTA TCGCCATGGC CGAAGCCTTA AGTAATTGCG ATCTCACCAC ACGCCTGCGT CAACGTGGGC AATTGCCATC TCCTAAAATG GACATCATGC ATTTTGCCGA TCAACTGGCG ATTCAACGTA ACTTGATGCC GTTATTAGCC AGCGCCTAG
|
Protein sequence | MQIDVPLINE AQIGSRLNAA IEHNRRGEFA LLLSLLSADA RDMAQFQWQK ELDNAEKLQR QFELPPKQAL LADLSTDNNV TDNSAVFAEQ GARAFQLQQA LRPEALVIRG GEPIAMAEAL SNCDLTTRLR QRGQLPSPKM DIMHFADQLA IQRNLMPLLA SA
|
| |