Gene Shewana3_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2162 
Symbol 
ID4478358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2590896 
End bp2591384 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content50% 
IMG OID639726750 
Producthypothetical protein 
Protein accessionYP_869798 
Protein GI117920606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00149059 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCG ATGTTCCTTT AATCAACGAA GCCCAAATTG GCTCCCGCTT AAATGCGGCA 
ATCGAACACA ACAGGCGAGG AGAGTTCGCC CTGTTGCTAT CGCTATTGTC TGCAGATGCG
AGGGACATGG CGCAGTTTCA ATGGCAAAAA GAGCTCGATA ATGCAGAAAA ATTGCAACGT
CAGTTTGAGT TACCCCCAAA GCAAGCGCTT CTAGCGGATT TATCGACGGA TAACAATGTT
ACCGACAATA GTGCTGTTTT CGCCGAGCAA GGGGCGAGGG CGTTTCAACT GCAACAGGCA
TTGCGCCCTG AAGCCTTAGT GATCCGCGGT GGCGAGCCTA TCGCCATGGC CGAAGCCTTA
AGTAATTGCG ATCTCACCAC ACGCCTGCGT CAACGTGGGC AATTGCCATC TCCTAAAATG
GACATCATGC ATTTTGCCGA TCAACTGGCG ATTCAACGTA ACTTGATGCC GTTATTAGCC
AGCGCCTAG
 
Protein sequence
MQIDVPLINE AQIGSRLNAA IEHNRRGEFA LLLSLLSADA RDMAQFQWQK ELDNAEKLQR 
QFELPPKQAL LADLSTDNNV TDNSAVFAEQ GARAFQLQQA LRPEALVIRG GEPIAMAEAL
SNCDLTTRLR QRGQLPSPKM DIMHFADQLA IQRNLMPLLA SA