Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2159 |
Symbol | |
ID | 4478355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2587413 |
End bp | 2587907 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639726747 |
Product | SecC motif-containing protein |
Protein accession | YP_869795 |
Protein GI | 117920603 |
COG category | [S] Function unknown |
COG ID | [COG3012] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0117714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACACG ACAAAACCTG CCCTTGCGGC AGCCCAAAAA TCTATCAAGA TTGCTGTCAA ATACTGCATC TAGGGCTCGA TTCAGGAGCA CAACTGGCGA CAAGTCCTGA GCAATTAATG CGCTCTCGCT ACTGCGCTTT TGTGTTGAAA AATTTTGATT ACATTATCAA AACACACCAT GCAGCTTACC TCGATGGCTT AACCCTTGAG CAGCTCCAAC AAGGTCCACA TCCCGAATGG TTAGGGCTCG ATGTATTATC CGCCAATGAC ACTACCCAGC CCGATGGCAG CAAGTTCGGT ACTGTAACTT TCAAAGCCTG GTATAAAATG AGTGGCGAGA TTGATGCCAT TTACGAGCGC TCTGAGTTTA TCTTCGAGCA AGGTCGTTGG TTTTACACTA AAGGCCATCA AATGCATGCC AAATTACCGG GGCGTAATGA TCCTTGCGTC TGCCACAGCG GTAAAAAGTT TAAGCAGTGC TGCATGAAGG GTTAA
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Protein sequence | MTHDKTCPCG SPKIYQDCCQ ILHLGLDSGA QLATSPEQLM RSRYCAFVLK NFDYIIKTHH AAYLDGLTLE QLQQGPHPEW LGLDVLSAND TTQPDGSKFG TVTFKAWYKM SGEIDAIYER SEFIFEQGRW FYTKGHQMHA KLPGRNDPCV CHSGKKFKQC CMKG
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