Gene Shewana3_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2159 
Symbol 
ID4478355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2587413 
End bp2587907 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content47% 
IMG OID639726747 
ProductSecC motif-containing protein 
Protein accessionYP_869795 
Protein GI117920603 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0117714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACG ACAAAACCTG CCCTTGCGGC AGCCCAAAAA TCTATCAAGA TTGCTGTCAA 
ATACTGCATC TAGGGCTCGA TTCAGGAGCA CAACTGGCGA CAAGTCCTGA GCAATTAATG
CGCTCTCGCT ACTGCGCTTT TGTGTTGAAA AATTTTGATT ACATTATCAA AACACACCAT
GCAGCTTACC TCGATGGCTT AACCCTTGAG CAGCTCCAAC AAGGTCCACA TCCCGAATGG
TTAGGGCTCG ATGTATTATC CGCCAATGAC ACTACCCAGC CCGATGGCAG CAAGTTCGGT
ACTGTAACTT TCAAAGCCTG GTATAAAATG AGTGGCGAGA TTGATGCCAT TTACGAGCGC
TCTGAGTTTA TCTTCGAGCA AGGTCGTTGG TTTTACACTA AAGGCCATCA AATGCATGCC
AAATTACCGG GGCGTAATGA TCCTTGCGTC TGCCACAGCG GTAAAAAGTT TAAGCAGTGC
TGCATGAAGG GTTAA
 
Protein sequence
MTHDKTCPCG SPKIYQDCCQ ILHLGLDSGA QLATSPEQLM RSRYCAFVLK NFDYIIKTHH 
AAYLDGLTLE QLQQGPHPEW LGLDVLSAND TTQPDGSKFG TVTFKAWYKM SGEIDAIYER
SEFIFEQGRW FYTKGHQMHA KLPGRNDPCV CHSGKKFKQC CMKG