| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2149 |
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| Symbol | |
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| ID | 4478345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2573951 |
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| End bp | 2575777 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639726737 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_869785 |
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| Protein GI | 117920593 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00662337 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.165329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTCAG TCGTTCAATC TGTTACCGAC AGAATTATTG CCCGTAGCAA AGCATCTCGT
GAAGCGTATT TAGCCGCGTT AAATGATGCT CGTAACCATG GCGTACACCG TAGCTCCTTA
AGCTGCGGTA ACTTAGCCCA CGGTTTTGCT GCTTGTAGTC CAGATGACAA AAATTCATTG
CGTCAACTGA CCAAAGCTAA CATCGGGATT ATTACCGCAT TCAACGATAT GTTGTCTGCA
CACCAACCCT ATGAAACCTA TCCTGAATTG CTGAAAAAAG CTTGTCAGGA AGTGGGCAGT
GTTGCACAGG TCGCAGGTGG TGTACCTGCA ATGTGTGACG GTGTGACTCA AGGTCAACCC
GGGATGGAAC TGAGCTTACT GAGTCGTGAA GTGATTGCCA TGGCGACGGC GGTGGGCTTA
TCCCACAACA TGTTTGATGG CGCCTTATTA CTGGGTATCT GCGACAAAAT CGTGCCGGGC
TTATTGATTG GCGCCTTAAG TTTTGGCCAT TTACCTATGC TGTTTGTGCC TGCAGGCCCA
ATGAAGTCGG GGATCCCAAA CAAGGAAAAA GCCCGTATTC GCCAGCAATT TGCCCAAGGT
AAAGTCGATA GAGCGCAGCT GCTTGAAGCC GAAGCGCAGT CTTATCACAG CGCTGGCACT
TGTACCTTCT ACGGTACGGC TAACTCGAAC CAGCTGATGC TCGAAGTCAT GGGGCTGCAA
TTGCCGGGTT CATCCTTTGT GAATCCTGAC GACCCACTGC GTGAAGCGCT GAATAAAATG
GCGGCCAAGC AGGTGTGCCG CTTAACAGAG CTTGGCACTC AATACAGCCC AATCGGTGAA
GTGGTTAACG AGAAATCCGT GGTGAACGGC ATAGTGGCGC TACTGGCAAC GGGTGGTTCA
ACTAACTTAA CCATGCACAT TGTGGCGGCG GCGCGTGCGG CTGGCATTAT CGTGAACTGG
GATGATTTTT CTGAATTATC TGACGCGGTT CCTTTGCTGG CCCGTGTTTA TCCAAACGGT
CATGCGGACA TTAACCACTT CCACGCCGCG GGCGGTATGG CTTTCCTTAT CAAGGAATTA
CTCGACGCGG GCCTCCTACA TGAGGATGTC AACACAGTTG CCGGTTTTGG TCTACGTCGT
TACACCCAAG AGCCAAAATT ACTCGATGGC GAGCTGCGCT GGGTCGATGG TCCAACCGTC
AGCTTAGATA CTGAAGTATT AACGTCTGTC GCTACGCCTT TCCAAAACAA CGGTGGCTTA
AAACTGCTTA AGGGCAACTT GGGCCGTGCG GTGATTAAAG TGTCAGCCGT GCAAGAAAAA
CACCGTGTAG TTGAAGCGCC TGCCGTGGTG ATTGACGATC AAAACAAACT CGATGCGCTG
TTTAAATCCG GCGCATTAGA CCGAGATTGT GTGGTGGTAG TTAAAGGCCA AGGGCCGAAA
GCGAACGGTA TGCCTGAGCT GCACAAGTTA ACGCCACTGT TAGGCTCTCT GCAGGATAAA
GGCTTTAAAG TGGCTCTGAT GACCGACGGT CGTATGTCGG GCGCATCGGG CAAAGTACCA
GCCGCAATTC ACTTAACGCC AGAGGCTATC GATGGAGGGC TAATTGCCAA AGTGCAAGAT
GGCGATCTGA TTCGTGTCGA CGCACTGACC GGTGAGCTGA GCTTATTGGT CTCCGATGCC
GAACTTGCCG CGAGAACCGC CGCTGAAATC GATTTACGCC ACTCACGCTA TGGAATGGGC
CGTGAGTTGT TTGGGGCACT GCGTTCAAAT TTAAGCAGTC CAGAAACTGG TGCGCGCAGT
ACCAGCGCCA TTGACGAACT TTATTAA
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| Protein sequence | MHSVVQSVTD RIIARSKASR EAYLAALNDA RNHGVHRSSL SCGNLAHGFA ACSPDDKNSL
RQLTKANIGI ITAFNDMLSA HQPYETYPEL LKKACQEVGS VAQVAGGVPA MCDGVTQGQP
GMELSLLSRE VIAMATAVGL SHNMFDGALL LGICDKIVPG LLIGALSFGH LPMLFVPAGP
MKSGIPNKEK ARIRQQFAQG KVDRAQLLEA EAQSYHSAGT CTFYGTANSN QLMLEVMGLQ
LPGSSFVNPD DPLREALNKM AAKQVCRLTE LGTQYSPIGE VVNEKSVVNG IVALLATGGS
TNLTMHIVAA ARAAGIIVNW DDFSELSDAV PLLARVYPNG HADINHFHAA GGMAFLIKEL
LDAGLLHEDV NTVAGFGLRR YTQEPKLLDG ELRWVDGPTV SLDTEVLTSV ATPFQNNGGL
KLLKGNLGRA VIKVSAVQEK HRVVEAPAVV IDDQNKLDAL FKSGALDRDC VVVVKGQGPK
ANGMPELHKL TPLLGSLQDK GFKVALMTDG RMSGASGKVP AAIHLTPEAI DGGLIAKVQD
GDLIRVDALT GELSLLVSDA ELAARTAAEI DLRHSRYGMG RELFGALRSN LSSPETGARS
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