| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2144 |
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| Symbol | |
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| ID | 4478340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2567673 |
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| End bp | 2569055 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639726732 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_869780 |
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| Protein GI | 117920588 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0101498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00125145 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGAAC CGACAGCGTT AAGTCTTATT CCACCTCTGG TGGTATTGGT GTTGGCCATT
TGGTTACGCC GCCCCATTCT TTCTCTGATC ATTGGTGCGG TAACTGGTTT CCTGTTACTC
GATCCGTCGC AAGTCTTAAA TAATTTCGCC AGCACTTCAT TAAAAGTCAT GGCCGATGAA
ACCATCGGTT GGTTGATTTT AGTCTGTGGT TGTTTTGGTG CGTTAATTGC CCTGTTAGTG
CGTACTGGTG GTGCACTGGC GTTTGGTCGA AATGCACTAA AATTTGCTAA AGGCCCTAAA
TCCTCTCTGT TTATGACCTT TATTCTCGGG ATTGTGATTT TTATCGATGA CTATCTGAAC
GCGTTAACCG TGGGTGAAAC CATGAAGCGT GTGACCGATA AGTTTAAAGT GTCCCGTGAA
ATGCTAGCCT ATGTGGTTGA CTCTACCGCA GCGCCAGTGT GCGTGCTCGT GCCATTATCC
ACCTGGGCAG TATTCTTTGG TGGCTTGCTG GTCGATAACG GTGTGGCGGC AGAAGGTCAG
GGCATTAGCG TATATATGCA GGCGATCCCC TACATGCTTT ACGCTTGGTT AGCCGTAGCT
ATGGTGTTAC TGGTGGTGTT AGGTGTTGTG CCTGCCATTG GTCCGATGAA AAAAGCCCAG
CTGCGCGCCG CCCAAGGTGA ACCTGCTGAG GCGCAAGTCG ATTTAGACCA GGTACAAACC
TCTGACGAAT ACGCGATTGC TGCGATTGAA GAAGAGTTTA AGCATGCCGA CAATCAGGGC
AAGCTGCACA ACTTCTTAGT GCCTATTCTG CTACTGGTTG CCTTTACCGT TTATTTTGAT
ATCGACGTGT GGAAGGGCTT GTTAGCGACA TTAGTTATCA CGCTGCCTTA CTATGCAGTG
CAACGTTTAA TGCCACTGTC AGAAATGATG GATCAGATGA TCGATGGTTT TAAGAGCATG
CTGCCCGCTA TTGGTACCGT GATCGCCGCA TTCGTGTTTA AGGATGTATG TGATGCGCTG
CTGCTGCCAC AATATGTGAT TGAATCATTG AGCCCATTCA TGACGCCTAA GATGTTGCCT
GCGGTAGTAT TCCTCTCTAT GGCGATCCTT GCCTTTGCGA CGGGTTCAAG CTGGGGTATT
TTTGCGGTGA CCATTCCAAT TGTGATGCCA CTGGCGCAAT CGGTTGGTGC GGATATTCCA
CTGGTGATTG GTGCGCTGCT GTCGGCATCA TCATTTGGTA GCCAAGCGTG TTTCTACTCA
GATTCAACCG TATTGGCCGC ACAAGGCTCT GGTTGTAACT TAGTGAGCCA TGCGGTGACT
CAGTTACCCT ATGCGTTAAT TGCCGCTGTG ATTGCGTTCT TTGGCTTTAT CTTGATTGCC
TAA
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| Protein sequence | MSEPTALSLI PPLVVLVLAI WLRRPILSLI IGAVTGFLLL DPSQVLNNFA STSLKVMADE
TIGWLILVCG CFGALIALLV RTGGALAFGR NALKFAKGPK SSLFMTFILG IVIFIDDYLN
ALTVGETMKR VTDKFKVSRE MLAYVVDSTA APVCVLVPLS TWAVFFGGLL VDNGVAAEGQ
GISVYMQAIP YMLYAWLAVA MVLLVVLGVV PAIGPMKKAQ LRAAQGEPAE AQVDLDQVQT
SDEYAIAAIE EEFKHADNQG KLHNFLVPIL LLVAFTVYFD IDVWKGLLAT LVITLPYYAV
QRLMPLSEMM DQMIDGFKSM LPAIGTVIAA FVFKDVCDAL LLPQYVIESL SPFMTPKMLP
AVVFLSMAIL AFATGSSWGI FAVTIPIVMP LAQSVGADIP LVIGALLSAS SFGSQACFYS
DSTVLAAQGS GCNLVSHAVT QLPYALIAAV IAFFGFILIA
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