Gene Shewana3_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2142 
Symbol 
ID4478338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2566187 
End bp2566909 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content47% 
IMG OID639726730 
Productintegrase catalytic subunit 
Protein accessionYP_869778 
Protein GI117920586 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000318686 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000276825 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTGCAAA CGGTACAATA TGAACGGTTA TTTCAACCGC GAGTCGGTAC GCGTAAACTG 
CAGTATTTAC TCAACAAAAT GCATCAAATA GTGATAGGAC GAGACCGGTT ATTTCGCTGT
CTTAGGGCGC ATCGTTTGTT GGTCACGCCG AAACGGGCGT ACCATAAAAC GACCCATAGC
CATCATCGAT TTAGGTGTCA TCCCAACTTG CTTAAGCCCA GTGAGCAGCA AGTGGACATC
AGCCGCTCAG AACAAGTCTG GGTGGCTGAT ATTACCTATC TGTCACTGCA AGATAATGAA
GCCTATTTAA GCTTGGTGAC CGATGCCTGG TCACGAAAAA TTGTGGGTTA TCATGTTGAT
GATAATCTTA AAACAGACGG GGTGCTAACG GCTTACAAAC GGGCACTGAG ACAGCGACAA
GATAAAAGTA AACCGCTGAT ACACCACTCA GACCGAGGGA TACAGTACTG CTCAAACGCG
TATCAAGCGG TTCACGCACA ACATGGCGTG ACATGCTCAA TGACAGACGG ATATGACTGC
TATCAAAATG CCTTAGCAGA GCGAGTGAAT GGCATCTTGA AGCAGGAGTT TTTAACACAT
AAGCCCGCAA CGCTGGAGGA GGCGCGACAA ATGGTGGCAG AAGCGGTTGC CATCTATAAT
CAACGACGGC CACATTTGGC CTTAAAATAC AAAACGCCCG ATGAGGTTCA TCGAGCGTTT
TAG
 
Protein sequence
MVQTVQYERL FQPRVGTRKL QYLLNKMHQI VIGRDRLFRC LRAHRLLVTP KRAYHKTTHS 
HHRFRCHPNL LKPSEQQVDI SRSEQVWVAD ITYLSLQDNE AYLSLVTDAW SRKIVGYHVD
DNLKTDGVLT AYKRALRQRQ DKSKPLIHHS DRGIQYCSNA YQAVHAQHGV TCSMTDGYDC
YQNALAERVN GILKQEFLTH KPATLEEARQ MVAEAVAIYN QRRPHLALKY KTPDEVHRAF