Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2142 |
Symbol | |
ID | 4478338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2566187 |
End bp | 2566909 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639726730 |
Product | integrase catalytic subunit |
Protein accession | YP_869778 |
Protein GI | 117920586 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000318686 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000276825 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGTGCAAA CGGTACAATA TGAACGGTTA TTTCAACCGC GAGTCGGTAC GCGTAAACTG CAGTATTTAC TCAACAAAAT GCATCAAATA GTGATAGGAC GAGACCGGTT ATTTCGCTGT CTTAGGGCGC ATCGTTTGTT GGTCACGCCG AAACGGGCGT ACCATAAAAC GACCCATAGC CATCATCGAT TTAGGTGTCA TCCCAACTTG CTTAAGCCCA GTGAGCAGCA AGTGGACATC AGCCGCTCAG AACAAGTCTG GGTGGCTGAT ATTACCTATC TGTCACTGCA AGATAATGAA GCCTATTTAA GCTTGGTGAC CGATGCCTGG TCACGAAAAA TTGTGGGTTA TCATGTTGAT GATAATCTTA AAACAGACGG GGTGCTAACG GCTTACAAAC GGGCACTGAG ACAGCGACAA GATAAAAGTA AACCGCTGAT ACACCACTCA GACCGAGGGA TACAGTACTG CTCAAACGCG TATCAAGCGG TTCACGCACA ACATGGCGTG ACATGCTCAA TGACAGACGG ATATGACTGC TATCAAAATG CCTTAGCAGA GCGAGTGAAT GGCATCTTGA AGCAGGAGTT TTTAACACAT AAGCCCGCAA CGCTGGAGGA GGCGCGACAA ATGGTGGCAG AAGCGGTTGC CATCTATAAT CAACGACGGC CACATTTGGC CTTAAAATAC AAAACGCCCG ATGAGGTTCA TCGAGCGTTT TAG
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Protein sequence | MVQTVQYERL FQPRVGTRKL QYLLNKMHQI VIGRDRLFRC LRAHRLLVTP KRAYHKTTHS HHRFRCHPNL LKPSEQQVDI SRSEQVWVAD ITYLSLQDNE AYLSLVTDAW SRKIVGYHVD DNLKTDGVLT AYKRALRQRQ DKSKPLIHHS DRGIQYCSNA YQAVHAQHGV TCSMTDGYDC YQNALAERVN GILKQEFLTH KPATLEEARQ MVAEAVAIYN QRRPHLALKY KTPDEVHRAF
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