Gene Shewana3_2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2141 
Symbol 
ID4478337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2565576 
End bp2566136 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content44% 
IMG OID639726729 
Productelongation factor P 
Protein accessionYP_869777 
Protein GI117920585 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000141842 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000269097 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACTG CTCATGAAGT CCGTCCTGGT AACGTGATCA TGTTTGAAGG CAGCCCATGG 
GTTGTACAGA AAACAGAAAC AACTCGTTCT GGCCGTAACG CTGCCATCGT TAAGTTAAAG
CTGAAAAACT TACTGCTTAA CTCTGGTACT GAAACCACTT TCAAAGGTGA AGATAAGATT
GACGATATTA TCCTAGATCG TCTGGATTGT ACTTATTCTT ACTTTGCTGA TCCTATGTAC
GTGTTCATGG ATGCAGAATA CAACCAATAC GACGTAGAAG CTGAGAACTT AGGTGATGCT
GCGGCTTACA TCGTTGACGG TATGGAAGAA ACTTGCCAAG TAACTTTCTA CGAAGGCAAA
GCAATTTCTG TTGAAATGCC AACCACTATC GTACGTGAAG TGATCTACAC TGAGCCATCA
GCTCGTGGCG ATACTTCAGG TAAAGTAATG AAGCCAGCAA CTATCACTGG CGGCGGTACA
ATCAGCGTGG CTGACTTCGT TAAAGTTGGC GACAAGATTG AAATCGACAC TCGTACTGGC
GAATTCAAGA AGCGCGTATA A
 
Protein sequence
MKTAHEVRPG NVIMFEGSPW VVQKTETTRS GRNAAIVKLK LKNLLLNSGT ETTFKGEDKI 
DDIILDRLDC TYSYFADPMY VFMDAEYNQY DVEAENLGDA AAYIVDGMEE TCQVTFYEGK
AISVEMPTTI VREVIYTEPS ARGDTSGKVM KPATITGGGT ISVADFVKVG DKIEIDTRTG
EFKKRV