Gene Shewana3_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2139 
Symbol 
ID4478335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2563743 
End bp2564270 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content48% 
IMG OID639726727 
Productflavodoxin FldA 
Protein accessionYP_869775 
Protein GI117920583 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID[TIGR01752] flavodoxin, long chain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000959174 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000640703 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCAACTG TAGGTCTTTT TTTCGGTAGC GACACAGGCA ACACCGAAGC TGTCGCCAAG 
ATGATCCAGA AGAAACTGGG TAAGAAAATG GTTGAGGTGA AAGATATCGC CAAGAGCACC
AAAGAACAGA TCGCAGAATA CGACCTGCTG CTGTTCGGCA TCCCAACCTG GTATTACGGT
GAAGCACAGT GCGACTGGGA TGACTTTTTC CCTGAATTAG AACAGATTGA TTTTACAGAC
AAACTGGTTG CTATCTTCGG TTGTGGTGAC CAAGAAGACT ACGCAGAATA CTTCCTCGAT
GCCATGGGCA TGGTGGGCGA TATCGTTCAA GCTCGTGGCG GTATCATCAT CGGTCACTGG
CCAACGGCTG GTTATAACTT CGAAGCGTCA AAAGGCTTAG TCGATGATGA CCACTTCATC
GGTTTAGGGA TTGACGAAGA CCGTCAACCA GAGCTGACTG AAGAGCGTGT GGATGCTTGG
GTTAAGCAAA TCTACGAAGA AATGTGCTTA GCCGAGTTCG AAGACTAA
 
Protein sequence
MATVGLFFGS DTGNTEAVAK MIQKKLGKKM VEVKDIAKST KEQIAEYDLL LFGIPTWYYG 
EAQCDWDDFF PELEQIDFTD KLVAIFGCGD QEDYAEYFLD AMGMVGDIVQ ARGGIIIGHW
PTAGYNFEAS KGLVDDDHFI GLGIDEDRQP ELTEERVDAW VKQIYEEMCL AEFED