Gene Shewana3_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2125 
Symbol 
ID4478677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2550566 
End bp2551078 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content52% 
IMG OID639726713 
Productsuperoxide dismutase, copper/zinc binding 
Protein accessionYP_869761 
Protein GI117920569 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2032] Cu/Zn superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0013475 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0132534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA TCGTGTTACT GCTTGCATCA ATGTCTGCTG CCTGTGCATT TGCAGACGTG 
AGTGTGCCAA TGAATCTTGT CAACGAAAAG GGCGTGGGTG AAAGTGTCGG TCAAGTGACC
ATTTCTGAGT CGCAGTATGG AGTGGTATTT ACGCCATCAC TCAAAGGCTT AATGCCGGGA
TTACATGGTT TCCATCTACA TGAGAACGGC AGCTGTGATC CAAAGGAAAA GGACGGAAAA
ATCGTCCCTG CTGGCGCGGC AGGTGGACAC TATGATCCTG CCGCCACGAA AGCCCATGGC
ACGCCATGGG GAGAAGGGCA TTTAGGCGAT CTACCACCAT TGTTTGTCGA TGCAGACGGT
GCAGCTAGTC AGGCCGTGCT GGCACCGCGC TTAAAAATGG GTGATCTTAA AGGCCATGCG
ATCATGATCC ATGCCGGTGG CGACAACCAT TCCGATCACC CAGCGCCTTT AGGTGGCGGC
GGTGCGCGTG TAGCCTGCGG TATTATCAAT TAA
 
Protein sequence
MKNIVLLLAS MSAACAFADV SVPMNLVNEK GVGESVGQVT ISESQYGVVF TPSLKGLMPG 
LHGFHLHENG SCDPKEKDGK IVPAGAAGGH YDPAATKAHG TPWGEGHLGD LPPLFVDADG
AASQAVLAPR LKMGDLKGHA IMIHAGGDNH SDHPAPLGGG GARVACGIIN