Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2125 |
Symbol | |
ID | 4478677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2550566 |
End bp | 2551078 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639726713 |
Product | superoxide dismutase, copper/zinc binding |
Protein accession | YP_869761 |
Protein GI | 117920569 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2032] Cu/Zn superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0013475 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0132534 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACA TCGTGTTACT GCTTGCATCA ATGTCTGCTG CCTGTGCATT TGCAGACGTG AGTGTGCCAA TGAATCTTGT CAACGAAAAG GGCGTGGGTG AAAGTGTCGG TCAAGTGACC ATTTCTGAGT CGCAGTATGG AGTGGTATTT ACGCCATCAC TCAAAGGCTT AATGCCGGGA TTACATGGTT TCCATCTACA TGAGAACGGC AGCTGTGATC CAAAGGAAAA GGACGGAAAA ATCGTCCCTG CTGGCGCGGC AGGTGGACAC TATGATCCTG CCGCCACGAA AGCCCATGGC ACGCCATGGG GAGAAGGGCA TTTAGGCGAT CTACCACCAT TGTTTGTCGA TGCAGACGGT GCAGCTAGTC AGGCCGTGCT GGCACCGCGC TTAAAAATGG GTGATCTTAA AGGCCATGCG ATCATGATCC ATGCCGGTGG CGACAACCAT TCCGATCACC CAGCGCCTTT AGGTGGCGGC GGTGCGCGTG TAGCCTGCGG TATTATCAAT TAA
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Protein sequence | MKNIVLLLAS MSAACAFADV SVPMNLVNEK GVGESVGQVT ISESQYGVVF TPSLKGLMPG LHGFHLHENG SCDPKEKDGK IVPAGAAGGH YDPAATKAHG TPWGEGHLGD LPPLFVDADG AASQAVLAPR LKMGDLKGHA IMIHAGGDNH SDHPAPLGGG GARVACGIIN
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