| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2118 |
|---|
| Symbol | |
|---|
| ID | 4479526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 2541735 |
|---|
| End bp | 2542358 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639726703 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_869754 |
|---|
| Protein GI | 117920562 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.037012 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATAAAA AATGGTGGTT AGTGGGGCTT TGCTTGTGTG CGACAAGTCT GCAGGCAGAA
ACGATTTCCC TCGAATATAA AGGCTTTTAT GACAGATTAA AGCAAGTCAA TAAGGGAAAT
TATCAGTTAG TCGAAATCGC CTTTAGTGTA CCAATGCTAC CTAATTGTCA GATCCAGAGT
GGAAGCATTT CGAGTGAATT AAATTCAACG CCACTCACTT ATACTGCGGC GCAGCGGTTG
TTTATTCCCT TTGATGACGC GCTTAAAGAT CAACGCGCAT TAGTGAATCT AGAGTTTGAG
GGCAAGGCTG AGGGCTGTGG TATTGCAATG CAAGTCAGAG CTAAGCAGAC TTTAGCCACA
TACGACAAGG CGCGACTAGC GCAAATCGCC AGCGAAATGG ATGCTTTACT CGGAGCCATG
CAGGGCTTCC CGATGCGCTA TTTTAAGGAG CCAATCGCGG GATTAAACTT TGAATTTGCT
CAAGACCAAG CCGTTACTGT GACGCTTGAT GGGCGTGAGC AACAGGTGAA CAGCAGCTTT
AAGTTGAGTG TTGAGCAGCT TAACAGCTTG ACGTCGTTGC AATTTAGCCA AGCGCCGACC
GTGTTGAGCC CTTGGGTTAA GTAA
|
|---|
| Protein sequence | MHKKWWLVGL CLCATSLQAE TISLEYKGFY DRLKQVNKGN YQLVEIAFSV PMLPNCQIQS
GSISSELNST PLTYTAAQRL FIPFDDALKD QRALVNLEFE GKAEGCGIAM QVRAKQTLAT
YDKARLAQIA SEMDALLGAM QGFPMRYFKE PIAGLNFEFA QDQAVTVTLD GREQQVNSSF
KLSVEQLNSL TSLQFSQAPT VLSPWVK
|
|---|
| |