Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2114 |
Symbol | |
ID | 4479522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2538054 |
End bp | 2538746 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639726699 |
Product | hypothetical protein |
Protein accession | YP_869750 |
Protein GI | 117920558 |
COG category | [S] Function unknown |
COG ID | [COG2836] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.141432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.255263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGAAT ATAACGTCAC AGGGGCATTT CTGGTGGGGT TAATGGGCGC TGCCCACTGC TTTGGCATGT GTGGCGGCCT CGTTGGTGCC TTTTCTTCCC AACTGCCGAA TCCTAAACAG GGCAATCACT TAGCCCATCA ACTCACCTAC TTATTAAGCT ATAACCTCGG CCGGATCTTA AGTTATACCC TCGCAGGCGC CTTAGTCGGC GGTTCATCGG CCATGCTTGG GCACTTATTT GAACTCGACA GTTACCTGTT GATCCTAAGG ATCATTGCTG GCGTGATGAT GATTGCAACC GGGCTTTACA TTGCAAAAAT CTGGGTGGGG ATAGTGCAGA TTGAGCGCCT TGGCCAAGTG TTATGGCGCT ATCTGAAACC CTTAGCCCAA CGCCTCGTCC CCATCAATAC GCCAATGCAG GCCATCACCG CCGGACTCAT TTGGGGCTGG CTACCCTGCG GCTTGGTCTA TAGCACTTTA ACCTGGTCGG TGGCGGCAGG CTCTGCCAGT CAAGGCGCTT TGATTATGTT CGCCTTTGGA TTAGGGACAC TCCCCGCACT CCTGAGTGCC GGTGTTGCGG CCAAACGTTT GGCCAATTGG GTACAGCAAA AAACCGTTAG ATTATTGAGT GGCTTACTTT TAATTGCCTT TGGCGCACAA ACTTTATATA TCGCCCTGTC GCAGCTAAAC TAG
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Protein sequence | MIEYNVTGAF LVGLMGAAHC FGMCGGLVGA FSSQLPNPKQ GNHLAHQLTY LLSYNLGRIL SYTLAGALVG GSSAMLGHLF ELDSYLLILR IIAGVMMIAT GLYIAKIWVG IVQIERLGQV LWRYLKPLAQ RLVPINTPMQ AITAGLIWGW LPCGLVYSTL TWSVAAGSAS QGALIMFAFG LGTLPALLSA GVAAKRLANW VQQKTVRLLS GLLLIAFGAQ TLYIALSQLN
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