Gene Shewana3_2114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2114 
Symbol 
ID4479522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2538054 
End bp2538746 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content52% 
IMG OID639726699 
Producthypothetical protein 
Protein accessionYP_869750 
Protein GI117920558 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.141432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.255263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGAAT ATAACGTCAC AGGGGCATTT CTGGTGGGGT TAATGGGCGC TGCCCACTGC 
TTTGGCATGT GTGGCGGCCT CGTTGGTGCC TTTTCTTCCC AACTGCCGAA TCCTAAACAG
GGCAATCACT TAGCCCATCA ACTCACCTAC TTATTAAGCT ATAACCTCGG CCGGATCTTA
AGTTATACCC TCGCAGGCGC CTTAGTCGGC GGTTCATCGG CCATGCTTGG GCACTTATTT
GAACTCGACA GTTACCTGTT GATCCTAAGG ATCATTGCTG GCGTGATGAT GATTGCAACC
GGGCTTTACA TTGCAAAAAT CTGGGTGGGG ATAGTGCAGA TTGAGCGCCT TGGCCAAGTG
TTATGGCGCT ATCTGAAACC CTTAGCCCAA CGCCTCGTCC CCATCAATAC GCCAATGCAG
GCCATCACCG CCGGACTCAT TTGGGGCTGG CTACCCTGCG GCTTGGTCTA TAGCACTTTA
ACCTGGTCGG TGGCGGCAGG CTCTGCCAGT CAAGGCGCTT TGATTATGTT CGCCTTTGGA
TTAGGGACAC TCCCCGCACT CCTGAGTGCC GGTGTTGCGG CCAAACGTTT GGCCAATTGG
GTACAGCAAA AAACCGTTAG ATTATTGAGT GGCTTACTTT TAATTGCCTT TGGCGCACAA
ACTTTATATA TCGCCCTGTC GCAGCTAAAC TAG
 
Protein sequence
MIEYNVTGAF LVGLMGAAHC FGMCGGLVGA FSSQLPNPKQ GNHLAHQLTY LLSYNLGRIL 
SYTLAGALVG GSSAMLGHLF ELDSYLLILR IIAGVMMIAT GLYIAKIWVG IVQIERLGQV
LWRYLKPLAQ RLVPINTPMQ AITAGLIWGW LPCGLVYSTL TWSVAAGSAS QGALIMFAFG
LGTLPALLSA GVAAKRLANW VQQKTVRLLS GLLLIAFGAQ TLYIALSQLN