Gene Shewana3_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2106 
Symbol 
ID4479514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2530873 
End bp2531358 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content43% 
IMG OID639726691 
Producthypothetical protein 
Protein accessionYP_869742 
Protein GI117920550 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000121868 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.452338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACAT CTTGCATCAC AAGGTTAATT TTTGTGCTTA CTCGCAAACT TCTTCCGCTA 
TCCATCATGC TAGTTATGAT GAATCTCACA GCTTGTAATG AAAAAGCCAC GCAACAGGTC
GAAACAAAGG CTGTAGACCC AACACTTTGT GCTTTTACAC AGGGGGATTG CATTAAAAAC
GTCGCGGGTG TTGAACTGCG AATTAGCCTG TCACCAGCCC ATGCGCCGAG CGAAAAGCCA
TTAACATTGA AGCTATTAAC CTCAGAGCCG ATTGACAATC TTCAGATACG TTTAGAAGGT
CGAGATATGT TTATGGGCAT TATTCCTGTC AATCTTAATG AACTGAATAA AACTCACTAT
GAAGGACAGA TGATTTACGG TTCTTGCAGC AGCGGATACA TGGTGTGGCG AGGATTTATC
CGTTTTAACC GAAACGGAGA GGAGCACGCC GTTATTTTTG ACTTTCTTGC CGATAATCCT
CACTAA
 
Protein sequence
MLTSCITRLI FVLTRKLLPL SIMLVMMNLT ACNEKATQQV ETKAVDPTLC AFTQGDCIKN 
VAGVELRISL SPAHAPSEKP LTLKLLTSEP IDNLQIRLEG RDMFMGIIPV NLNELNKTHY
EGQMIYGSCS SGYMVWRGFI RFNRNGEEHA VIFDFLADNP H