Gene Shewana3_2094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2094 
Symbol 
ID4479502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2513971 
End bp2514882 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content43% 
IMG OID639726679 
Producthypothetical protein 
Protein accessionYP_869730 
Protein GI117920538 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00100358 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTATAGTC TGTATACATT AACATGTAGC AAAAACAGGC ATTACATGGT TACCGCTGAC 
GTTAAATGGG AGCAGCTTCT TAGATTTCGA CTCATTGAAA TCGTTGCCCT TTGGGAAGGC
AGGCTCACAA CCAATCATCT TTGCAATTCA TTCAACATCG GGCGGCAGCA AGCATCGAGA
GACATTGCTA ACTATCAGAA GCTTTTCGAA ATACCTCCGC TTGTTCATGA CCGGGGGATT
AAAGGCTATA GACCCACTAA TGACTTTAAA CCACGTTTTA CGCAGGGAAC GCCAAACGAG
TACCTGTCTC TATTAAACAA ATACACTAAC GAAAATATTG ATGGTTTTGA CCTTCAAGGG
CTAGGGCAAG CAAACTCGAT CGTGCTCAGT GTACCTGACC GCCATGTTGC ACCAATTATC
GTTAGGCGTT TGCTTCAAGC AGCAAGAGAG CAGCGATGTG TTGATGTTGA CTATGTTTCG
TTAGAGCACC CTTCTGAGCG AGGAAGAAAC ATTGCACCGC ACACCCTTGT TTTCGATGGT
TTTAGATGGC ACGTACGAGC TTACTGTGAA GAGAAGAAGG GATTTCGAGA CTTTGTTCTA
AGCCGATTCA GGAATGAACC TGAAATCCTC GATAAGTCTT CTTTGACCAA AGAAGATGAT
GACGATTGGA ACATCGAAGA AACTTTCGAA ATCACAACGA ACCCCTTTCT TACTCAAGAA
CAGCAACTGG TTGTAAAAGC AGACTATGGG ATGCTTGAAG CACAGTTTTT CGTATCTTGC
AGAAGAGCTT TGATTAAGTA TTACGTAAAA CGCCTAAACA TATGCCTTGA CACAAAAAAG
CTGAAATCTT CACCTCAAGC TAACCAGCTC ACGGTCGCTC AGCCACATAG TTTAAAACGG
TGGATCTTGT GA
 
Protein sequence
MYSLYTLTCS KNRHYMVTAD VKWEQLLRFR LIEIVALWEG RLTTNHLCNS FNIGRQQASR 
DIANYQKLFE IPPLVHDRGI KGYRPTNDFK PRFTQGTPNE YLSLLNKYTN ENIDGFDLQG
LGQANSIVLS VPDRHVAPII VRRLLQAARE QRCVDVDYVS LEHPSERGRN IAPHTLVFDG
FRWHVRAYCE EKKGFRDFVL SRFRNEPEIL DKSSLTKEDD DDWNIEETFE ITTNPFLTQE
QQLVVKADYG MLEAQFFVSC RRALIKYYVK RLNICLDTKK LKSSPQANQL TVAQPHSLKR
WIL