Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2091 |
Symbol | |
ID | 4479499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2510700 |
End bp | 2511323 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639726676 |
Product | formate dehydrogenase gamma subunit |
Protein accession | YP_869727 |
Protein GI | 117920535 |
COG category | [C] Energy production and conversion |
COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000354882 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATCATA AAGAAATGAT TGTCCGTCAT AAGCTCGTTG ATCGCCTGTG CCACTGGACC ATAGTCTTTG TTGGCCTAGT GACCTTTCTA ACGGGGTTCT CGTTTTTTTA TCCCTCGTTC CAGTGGCTAA GTGGCATTGT TGGCACACCA CAACTGGCAA AAGTGATGCA TCCATTCTTC GGGATCGCCA TGTGTCTGCT GCTGGCGGTG ATGTTGATCC GCTACTACCA GCACAATAAG TGGAATAAAT ACGATTTGCC CTGGATGAAA GCCGTGGTGT GGGTGTTACT GCAAAAAGAA GAGAACATTC CGCCCGTGGG CCATTACAAC CCAGGTCAGA AAATGTTATT CCGCGCCTTT GTGGTTTTTG TAATGGCGTT TCTGATCAGC GGCATCATGA TGTGGCAGCC TTATTTTGCG CCCATGTTCT CGGCAGAAGC CGTCAATTGG GCCACCTTAG TCCACTCGGC CTGCGGCGTG TTAATGCTGC TCTCCCTCGT GGTACATGTG TGGATGGCCT GCTGGATTGA AGGCTCTATC ACAGGGATGC TCTACGGCAA AGTCTCTAAG GCTTGGGCCC GTAAGCACCA TCCAGCGATG TTAGAAGAAC ACGAGGAAAA ATAG
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Protein sequence | MNHKEMIVRH KLVDRLCHWT IVFVGLVTFL TGFSFFYPSF QWLSGIVGTP QLAKVMHPFF GIAMCLLLAV MLIRYYQHNK WNKYDLPWMK AVVWVLLQKE ENIPPVGHYN PGQKMLFRAF VVFVMAFLIS GIMMWQPYFA PMFSAEAVNW ATLVHSACGV LMLLSLVVHV WMACWIEGSI TGMLYGKVSK AWARKHHPAM LEEHEEK
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