Gene Shewana3_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2088 
Symbol 
ID4476334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2505356 
End bp2506258 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content50% 
IMG OID639726673 
Producthypothetical protein 
Protein accessionYP_869724 
Protein GI117920532 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000545594 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAACGG TCACGGTTGG CGAGCTGTTG ATGACAATCC CTGTGGGCAA CCGCCTTGGT 
GAAGGTGTGC TATGGGATGA TTTACACCAA TCTATTTGGT GGACCGACAT TTTATCCTCT
GTGATTTATC GTTTTCATCT CGCGAGCCGC TCCTTAGAGA CTTTCCCCAT GCCGCACCGC
GTCGGCTCCT TTGGCCTCAC GGCAAAGCCT ACAACACTTA TCGTCGCATT CGATATCGGT
ATTGCAATCT ATGATATTGA AGATCAAAGC CTGACATGGT TGGCACAGCC AGAATCTCAT
TTTGCTGGCA ATCGCTTTAA TGATGGTCGC ATTGATAGGC AAGGGCGTTT TTGGGCGGGC
ACTATGGTTG AGCAGCGCGA TACTTTGCAA CAAACCGCAG CCCTGTATTG TCTAGATGAG
AAAGGGCATT GCCACCAACA CCTTACAAAT CTCGAAATCT CCAACGGCCT GTGCTGGAGC
GTGGATGGGC GAACGCTCTA CCATGCTGAT TCGCCAAAAC ACCAAATCTA TCAATATGAT
TTTGATATTG AGCAGGGGTT ATTGAGTCGT AAGCGCCTCT TTGCGAGCAC GAGCCATCAT
ATTTTCCCTG ATGGTTCAGA TGTCGATGCG GCGGGTTATC TCTGGAATGC CCAGTGGGGC
GGTGGCCAGG TAGTGCGCTA TCGTCCCGAT GGTGAAGTCG ATCTTATTCT CAAATTGCCA
GTTACCCACC CAACCAGCAT TGCTTTTGGC GGCGAAAAGC GTGATTTACT GATAGTCACC
AGTGCCAAAC ACTCACTTGA CGCATCGCAA TTAGACCAAG AGCCGCAAGC AGGCGATGTG
TTTATCTACC CATTACAGGG TATTTATGGT GTAAACAGCC CTCGTTTTTG CGGGCAGCTC
TAA
 
Protein sequence
MQTVTVGELL MTIPVGNRLG EGVLWDDLHQ SIWWTDILSS VIYRFHLASR SLETFPMPHR 
VGSFGLTAKP TTLIVAFDIG IAIYDIEDQS LTWLAQPESH FAGNRFNDGR IDRQGRFWAG
TMVEQRDTLQ QTAALYCLDE KGHCHQHLTN LEISNGLCWS VDGRTLYHAD SPKHQIYQYD
FDIEQGLLSR KRLFASTSHH IFPDGSDVDA AGYLWNAQWG GGQVVRYRPD GEVDLILKLP
VTHPTSIAFG GEKRDLLIVT SAKHSLDASQ LDQEPQAGDV FIYPLQGIYG VNSPRFCGQL