Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2088 |
Symbol | |
ID | 4476334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2505356 |
End bp | 2506258 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639726673 |
Product | hypothetical protein |
Protein accession | YP_869724 |
Protein GI | 117920532 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000000545594 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAACGG TCACGGTTGG CGAGCTGTTG ATGACAATCC CTGTGGGCAA CCGCCTTGGT GAAGGTGTGC TATGGGATGA TTTACACCAA TCTATTTGGT GGACCGACAT TTTATCCTCT GTGATTTATC GTTTTCATCT CGCGAGCCGC TCCTTAGAGA CTTTCCCCAT GCCGCACCGC GTCGGCTCCT TTGGCCTCAC GGCAAAGCCT ACAACACTTA TCGTCGCATT CGATATCGGT ATTGCAATCT ATGATATTGA AGATCAAAGC CTGACATGGT TGGCACAGCC AGAATCTCAT TTTGCTGGCA ATCGCTTTAA TGATGGTCGC ATTGATAGGC AAGGGCGTTT TTGGGCGGGC ACTATGGTTG AGCAGCGCGA TACTTTGCAA CAAACCGCAG CCCTGTATTG TCTAGATGAG AAAGGGCATT GCCACCAACA CCTTACAAAT CTCGAAATCT CCAACGGCCT GTGCTGGAGC GTGGATGGGC GAACGCTCTA CCATGCTGAT TCGCCAAAAC ACCAAATCTA TCAATATGAT TTTGATATTG AGCAGGGGTT ATTGAGTCGT AAGCGCCTCT TTGCGAGCAC GAGCCATCAT ATTTTCCCTG ATGGTTCAGA TGTCGATGCG GCGGGTTATC TCTGGAATGC CCAGTGGGGC GGTGGCCAGG TAGTGCGCTA TCGTCCCGAT GGTGAAGTCG ATCTTATTCT CAAATTGCCA GTTACCCACC CAACCAGCAT TGCTTTTGGC GGCGAAAAGC GTGATTTACT GATAGTCACC AGTGCCAAAC ACTCACTTGA CGCATCGCAA TTAGACCAAG AGCCGCAAGC AGGCGATGTG TTTATCTACC CATTACAGGG TATTTATGGT GTAAACAGCC CTCGTTTTTG CGGGCAGCTC TAA
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Protein sequence | MQTVTVGELL MTIPVGNRLG EGVLWDDLHQ SIWWTDILSS VIYRFHLASR SLETFPMPHR VGSFGLTAKP TTLIVAFDIG IAIYDIEDQS LTWLAQPESH FAGNRFNDGR IDRQGRFWAG TMVEQRDTLQ QTAALYCLDE KGHCHQHLTN LEISNGLCWS VDGRTLYHAD SPKHQIYQYD FDIEQGLLSR KRLFASTSHH IFPDGSDVDA AGYLWNAQWG GGQVVRYRPD GEVDLILKLP VTHPTSIAFG GEKRDLLIVT SAKHSLDASQ LDQEPQAGDV FIYPLQGIYG VNSPRFCGQL
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