| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2085 |
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| Symbol | |
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| ID | 4476331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2497516 |
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| End bp | 2500353 |
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| Gene Length | 2838 bp |
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| Protein Length | 945 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639726670 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_869721 |
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| Protein GI | 117920529 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000059831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000324721 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTTAAAC AGACTTATTT GGCAAGTGCT ATTCTGCTTG CTCTTGCTAG TCAAGCGACG
TATGCGGCAG AAGCTGAAGC GACACAATCG CCTCAGACGG AAGAAACGTC ACGCCCCTCT
TCTGGCGGTA AAGCGCAAAA TAACGAAGAG ATGGAGATCA TTCAGGTTCA GGGGATCCGT
GGTAGTTTAA ATAAAGCGGT AGAACTTAAA CGCCAAAACA TTCAAGTTGT CGATGCCATT
ATTGCCGAAG ATATCGGTAA GTTCCCAGAT AATAACGTGG TTGAAGCCTT GCAACGGGTA
ACGGGTGTTC AAGTGACTGA CCGTGCATCA GGTGAAGCCA ATACCGTGAG TATTCGTGGT
TTAACCGACG TAACCACTAC AGTTAACGGC CGTCAAGTTT TCACTGCAGC AGGTCGTGAA
GTCGCTATTG CTGACGTACC TGCGGCATTA CTCGGCAGTG TTGAAGTCTT TAAAACCCGC
TCTTCTTCTC AAGTCGCCAG CGGTATCGCG GGTCAAATTG ACATTCGTAC CCATAGACCT
TTTGATTTCC AAGAAGAAAA AATTTCGGTA GCAGCCAAAG GGATTTACTC TGATCAGCCT
GACACTATCG ATCCCAATTT CAGCGCCTTA ATTAGCGACC GCTGGGATAC CAGCATCGGT
GAAGTCGGCG CATTAGTTAA CGTCTCCTAT ATCCGCACCA ACTATAATGA TCAAGTGGTT
GCACCTGGCG CATCAATGCC CTATTACGCT GAAACTGGTG TCCAAATCCC TGATACTTAT
TGGAAGCGTG GCCTAGCCCA TGGTTTAGAT ACCAGTGAAG GGGCATTAAT CAACGGTCAG
GAATATCTGC TCATGCGCGA CGCCGTATTC CAAAATATGA ATAACGGTGA GCGTGAACGT
CCAGCACTGA ACCTATCATT GCAATGGGCG CCAACTGACA CTTCCGAATA TCTTTTTGAA
GCATTCTATA ACGGTTATCG TAATGATAAC TTCAACTCTA TGCTCTTTAG TAACGTAGAT
TCATCCGCTA ACTGGAGCCA AGTGATTCAA GATGGTATTG AAGTTTATGA TGGTACCAAC
GTGGTAAAAT CGCGAACTGC CTATAACGTT GACGGATTTA GCAGTTCAGA CCATAGCCAT
AACAAAACAG ATAGTTATGT ATTTGCCTTA GGAGGTAAGT GGGACTTTGA TAATTTGACC
TTAAAGTCTG AAGTGGTCTA TCAAACCAGT ACCTATGAAT CACAATTTCT GGCGATGCGC
GGTGTAAGCG CGAATAGCAC TAAGACTTTC TACGGTGTTG ATGTTGACTA TAACAACAAA
AGTGGTGGTG TACCTAGTTG GGTTTATTTA GATAATCCAG ATACAGATAT TAATGAGTCT
GATTTAACTC AATATGCCCT ATGGCAAACG GCTCAATTAT ACGATAGTGG CGCTAAGGAC
GAAGGTGATT CAGTTACTTG GACATTCGAT GGTGACTATT TCCTCGACTA CGGCATATTT
ACTAAGATGA AATTTGGTAT TCGTGCAGAA CAACGTGGTG CGAAACACGG ACTTTACGAT
GCCGGTTCCT TAAACACCAA CGTGTTATTT AGCGATCTTG ACCCTAACAT GTTCACCGTA
ACCTCCGGCT TCTTTGATGG CCGTGGTAAT GTGCCGACAA GTTGGGCGAT TGCCGATGGT
AATTATTTAT ATGCTAATCG CTCAGCTATT GAAGCTATGT ATAACGCCGA TGAGCAAGCC
CTTGCCATGT ATACCAACTA TGACATCACC GAAAAGTCAT ATGCTGCATA TATTCAAAGT
GATTTTGAAA CCGAGTTATG GGGTAAGCAA GTTGATGGTC AAATCGGCCT TCGCTATGAG
AAAGCCGATG CAGATATGGA TTTCTGGGAA CGCAAAAAAT ATGCTGCAGA GGATGTTGTT
GATGACATTC GATACTATCT CGTTCATGAC ACAGATACCA ATGGAAGTGC GGAGTTATTA
CCAAGCTTAA TGGTACGCTT CTGGTTAACT GACGACTTGG TTGCACGTTT TGCCTACACT
GAAACGATTC GTCGTCCCGC CTTTGGCGAT TTAACCACTG CGATTTCTTA TACAGAGGAC
TTAACAAAGC TTGGGTTCGG TCAAGCTTCA AGTGGTAACT CTAAGTTAGA ACCTACTACT
TCACAAAACT ATGATTTCTC ATTGGAATAT TACTTTGGTG AAGGATCTTC CATATTCGGT
ACTTATTTCC GTCGTGATAT TGAAGGTTTC GTATTTAACT CTTCTTCTAC TATTACCCGT
GAAGTTGACG GCGAAACCAA AAAATATATT TTAAGCCGTC CAGAAAACGC TTCAAACGGA
AAGCTGACAG GATTTGAGCT AGGTACTGTA TATTTCCCAG AGAATATGCC TAGTTACTTA
GATGGCTTAG GTACTCAAGT CAGTGCAACC TTCTTAGATT CAAGCCAAGA CATTCCTGAG
TTTGACTCTG AGAGTGGTGA GCAAATTGGT ACTACAACTC GTGAACTATT CGGTGTGTCT
GATACTTCTA TGAGTGCGGT ATTGATTTAC GATAAAGACG ATTACAGCGC GCGTTTATCA
TACACTTGGC GTGATAAATT CTTAAGTGCG TATGATGCAG GTAGCTTTGC AATGCCACGC
GGTATTTACC GTAAACCTGA GCAGTCACTT GACTTCCAGT TCAGCTACAA CATCAGTGAT
GAGTTTGTAT TAACCTTCGA TGCGACAAAT ATTCTTGATG ATATCTATCA AGAATACTAC
GAGGACTCAG TACTCTATAA CCGTACGAAC AGTATCTATA CTCGTACTTT TGCATTGGGT
GCGCGTTACT CCTTCTAA
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| Protein sequence | MFKQTYLASA ILLALASQAT YAAEAEATQS PQTEETSRPS SGGKAQNNEE MEIIQVQGIR
GSLNKAVELK RQNIQVVDAI IAEDIGKFPD NNVVEALQRV TGVQVTDRAS GEANTVSIRG
LTDVTTTVNG RQVFTAAGRE VAIADVPAAL LGSVEVFKTR SSSQVASGIA GQIDIRTHRP
FDFQEEKISV AAKGIYSDQP DTIDPNFSAL ISDRWDTSIG EVGALVNVSY IRTNYNDQVV
APGASMPYYA ETGVQIPDTY WKRGLAHGLD TSEGALINGQ EYLLMRDAVF QNMNNGERER
PALNLSLQWA PTDTSEYLFE AFYNGYRNDN FNSMLFSNVD SSANWSQVIQ DGIEVYDGTN
VVKSRTAYNV DGFSSSDHSH NKTDSYVFAL GGKWDFDNLT LKSEVVYQTS TYESQFLAMR
GVSANSTKTF YGVDVDYNNK SGGVPSWVYL DNPDTDINES DLTQYALWQT AQLYDSGAKD
EGDSVTWTFD GDYFLDYGIF TKMKFGIRAE QRGAKHGLYD AGSLNTNVLF SDLDPNMFTV
TSGFFDGRGN VPTSWAIADG NYLYANRSAI EAMYNADEQA LAMYTNYDIT EKSYAAYIQS
DFETELWGKQ VDGQIGLRYE KADADMDFWE RKKYAAEDVV DDIRYYLVHD TDTNGSAELL
PSLMVRFWLT DDLVARFAYT ETIRRPAFGD LTTAISYTED LTKLGFGQAS SGNSKLEPTT
SQNYDFSLEY YFGEGSSIFG TYFRRDIEGF VFNSSSTITR EVDGETKKYI LSRPENASNG
KLTGFELGTV YFPENMPSYL DGLGTQVSAT FLDSSQDIPE FDSESGEQIG TTTRELFGVS
DTSMSAVLIY DKDDYSARLS YTWRDKFLSA YDAGSFAMPR GIYRKPEQSL DFQFSYNISD
EFVLTFDATN ILDDIYQEYY EDSVLYNRTN SIYTRTFALG ARYSF
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