| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2081 |
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| Symbol | |
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| ID | 4476327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2491773 |
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| End bp | 2493218 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639726666 |
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| Product | sugar (glycoside-Pentoside-hexuronide) transporter |
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| Protein accession | YP_869717 |
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| Protein GI | 117920525 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0834729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000228967 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTTATC ATAAATTGTC AGTCATTGAA AAGATCGGTT ACGGCTCCGG GGACATGGCC
GTTAACGTGG TGATTTCGTC AATGATGTTA ATTATTACCT TCTTTTATAC CGATATTTTT
GGGTTAAAGC CCGCCGATGT CGGGATATTG TTCCTGCTGG TTCGTCTTAT CGATGCCATT
ACCGATCCTT TAATGGGCAT TATTAACGAT AAAGTGACGA CCCGCTGGGG AAGATATCGC
CCCTACTTCC TGTTTATGGC GATTCCCTTT GGTATTTCGG TGTTCTTAAC CTTCTCAACC
CCAGATTGGG ATTACAATGC CAAACTTATC TGGGCCTATT CGACTTATAT TCTGGTCACT
ATCATCTTTA CCACTGTCAC TATTCCGTAT ATTTCGATTA TCAGCGTGAT CACCGACGAT
CCAAAAGAGC GGTTATCCGC CAACGGTTAT CGTTTGTTCT TCGCCAAGAT TGCCGCCTTT
TTAGTGACCA TTATCGTGCC TATATTGGCG TCTGCCTGGG GCGGAGAGAA CATTGCCGCG
GGCTATCAAA AAGCCATGGG CGTGATGGCA TTGATGGCAA CCCTACTGTT TTTATTCTGC
TTTTTTACTA CCACAGAGCG CGTGGCCTAC AAGGTGGAAA CTAAGCCTGT TGGCATGCAA
CTGCGATTAT TGTTCAAAAA CGATCAATGG TTAGTACTAG TCGCGATTTG TGTGATTGGC
ACCATTGGCT ATGTGATCCG CGGCTCGGTA GCAGCCTACT ACGCGACCTA TTACTTGGGC
GGCGATGCCA AGATGCTCTC GGCATTCCTG TCGACCGGTG TTGGTGCAGC GATTCTTGCG
ATGGTCGCTT CAACTTGGAT CACTAAGCGT TACTGCAAAC TAAAACTCTT CCGCTACAGC
CAAATCGTGG TTGGGATCTT AAGCGCCATC ATGTTCTTTG CCGTGCAGCC GGGCGACATA
GTGCTGGCCT TCGTACTCTA CTTTGCGATT TCATTCGTGG TGGATTTACA TGCGCCTGTC
TTCTGGTCGG TGATTTCCGA GTCGGTGGAT TATGGCACAG TCAAAACGGG CCACAGGGTC
TCTGGCCTTG CCTTTGGCGG GATCTCATTC GCCCAAAAAG CGGGTATGGG CGCGGCGGGA
TTTGTGGTGG GTATGCTACT GACCTACTTC AACTATCAAC CCGGTGAAAC TCAAAGCGAA
TTTGCGTTGA CCGGTATTTC GTTAATGCTA ACGGTGATCC CTGGCGCATT CCACGCGCTG
ATGGGCTTAC TGATGTTCAA ATACAAGATT TCTGATCGCG TTTATGAAGA AATCAAACAG
GCTTTGCCCG AGCAGGCGCA TGTTAGCCAA ACGGACGCCA AGCAGACGTC TAAGGCTATA
GCCTCAGACA CTGTAACTGC TGAGACAGTA ACGCCTAAGA CTGCTGCGCC CCAAGTATCG
GCGTAA
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| Protein sequence | MSYHKLSVIE KIGYGSGDMA VNVVISSMML IITFFYTDIF GLKPADVGIL FLLVRLIDAI
TDPLMGIIND KVTTRWGRYR PYFLFMAIPF GISVFLTFST PDWDYNAKLI WAYSTYILVT
IIFTTVTIPY ISIISVITDD PKERLSANGY RLFFAKIAAF LVTIIVPILA SAWGGENIAA
GYQKAMGVMA LMATLLFLFC FFTTTERVAY KVETKPVGMQ LRLLFKNDQW LVLVAICVIG
TIGYVIRGSV AAYYATYYLG GDAKMLSAFL STGVGAAILA MVASTWITKR YCKLKLFRYS
QIVVGILSAI MFFAVQPGDI VLAFVLYFAI SFVVDLHAPV FWSVISESVD YGTVKTGHRV
SGLAFGGISF AQKAGMGAAG FVVGMLLTYF NYQPGETQSE FALTGISLML TVIPGAFHAL
MGLLMFKYKI SDRVYEEIKQ ALPEQAHVSQ TDAKQTSKAI ASDTVTAETV TPKTAAPQVS
A
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