| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2080 |
|---|
| Symbol | |
|---|
| ID | 4476326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 2489279 |
|---|
| End bp | 2491666 |
|---|
| Gene Length | 2388 bp |
|---|
| Protein Length | 795 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639726665 |
|---|
| Product | acetyl-CoA carboxylase, biotin carboxylase |
|---|
| Protein accession | YP_869716 |
|---|
| Protein GI | 117920524 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3533] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.254608 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00000268125 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACACTG CCCGATTGTT TGGCCTTTGC CTGTTATTGC CATTAACTTG CCCATTCGTA
TCCCAGCCAA GCTTTGCTAG TCTTACCCCC ATTCCGCTAA ACGATGTGCG CCTAACCGCC
GGGCCATTTC TGCATGCCCA GCAGACCGAT TTGGCTTACA TCATGTCGAT GGATCCCGAG
CGACTACTCG CCCCTTACCG CAAGGCCGCG GGAATTGCGA CCACGGCCGA CAACTACCCC
AATTGGGAAA ATACGGGCCT TGATGGCCAT ATCGGTGGGC ATTATCTATC GGCATTGGCC
CTAATGTATG CCGCCACGGG CGATCAGGCG GTGCTTTCGC GCCTCAACTA CATGGTGGCC
GAGTTGGAAA AGTGTCAACA GGCCCATGGC AATGGTTATG TGGGCGGTGT CCCTCATGGA
GACAAACTAT GGCAGCAGGT CGCCGCTGGC CATATCGAAG CGGATCTGTT TACGCTCAAC
CAATCATGGG TGCCTTGGTA TAACGTGCAT AAGGTATTCG CGGGCCTGCG GGATGCCTAT
CTTTATACTC AAAATCCCAC GGCGAAGAAA ATGCTCGTCG GTTTTGCCGA TTGGATGCTG
GATTTAAGTC GCAATCTAAG TGATGAGCAG CTGCAGCTTA TGCTGCGCAC CGAATACGGT
GGCTTAAATG AAACCTTAGC GGATGTGTAC AGCATTACAG GTCAAAACAA ATACTTAAAT
CTTGCGAATC GCTATACGGA TCAAAGCCTG TTACAACCCC TGTTGCAGCA TCAAGATAAA
CTGACGGGCC TACATGCCAA TACACAAATT CCTAAAATTG TCGGTGTGGC ACGTATTGCC
GAGCTGAGTA ATAACAAGGA ATGGTTAGAA AGCGCCGATT ATTTTTGGCA GCAAGTAGTT
CACCAGCGCA CCGTTTCCAT CGGTGGCAAC AGTGTGCGCG AGTATTTTCA TCCCAGCGAA
GATTTCAGCA GTATGCTTGA CTCGGTAGAA GGCCCTGAGA CTTGCAATAC CTACAACATG
TTGAAGCTGT CAAAATTACT GTATGAAAAC AAACGTGATT TACGCTATAT CGATTACTAC
GAGCGTGCAC TCTACAACCA TATCCTCTCG TCCCAGCATC CGCAAACTGG CGGCCTAGTG
TATTTTACGC CAATGCGCCC AGACCATTAC CGCGTCTATT CCTCGGCGCA GGAAAGTATG
TGGTGTTGTG TCGGCTCAGG CATCGAAAAC CATGCTAAAT ACGGCGAGCT CATCTATGCC
GAGGAGGACA ACAATCTGTT TGTGAACCTG TTTGTTGATT CTGAGGTCCA CTGGAAAGCC
AAAGGCATCA GCCTTAGCCA AAAAACTCAG TTCCCCGATG ACAATACTTC GCAGATGATT
ATCCATCAGG AGGCGGACTT TACCCTCAAT CTGCGCTATC CCACATGGGC TAAGGGTGAG
GTGACCGTGA GCATTAATGG CGAGCCGCAA AGGTTTACAC CGACTCAAGG GCAATATATT
CCCTTAACGC GGCACTGGCG CAAGGGCGAT AGCGTGACAA TCACCTTACC TATGGACATT
AGTCTTGAGC AGCTACCGGA TAAAAGCGCC TATTACTCAG TGCTTTATGG GCCAATTGTG
TTAGCGGCAA AAACGGCGCC TATCGCTAAC GAAGCCTTAA ACTTTATCGG CGATGCCAGT
CGCATGGGGC ATATTGCCAG TGGTCCTATG TGCGAACCCA GTCAGGCGCC GATTTTTATT
AGCGATGGTA CCCGCTTTTT AACCGATATC CGCCGTGAAC CCATGAGTCT GCTGCAATTT
ACCACGGGGA AAGCTCATAC AAATCAAGCG AGCCCCATCA CGCTGATCCC CTTCTTTCGC
CTGCATGACA GCCGCTATAC CTTGTATTTT GGCCAGAGTG CGCCCGATGA ATGGCAACAA
AAACAGCAAG AGTTAGCTCA AAAAGCCCAG ATGGAAGCCA AGCTGATGGC GCAAACCTTA
GATAGTGTGC AGCCTGGTGA GCAGCAACCT GAGTCGGATC ATTTCTTTAA GGCATCAAGG
AGTGAAGCAG GCCTTAATGG TAATCGCCAT TGGCGCCATG CCGAGGATTG GTTTAGCTAT
CAACTCGATG CTAAAGGTGA ACCGCGACCC ATATTGCGCT TAACCTACTT TGGGCTGGAT
GCAGGGCGAC GTTTCGACAT TTTGATTAAC GATAAACGCC TTGCCGAAGT CACTCTGCCT
GCCGATAAGG GGCCGATATT TTACAGCGTC GATTACCCTA TTCCCGCCGA CATGCTGTTG
GATAGCACAG TGCCCTTCAG GGTGAAATTT ATGGCAAAAC CGGGCTCGAT TGCCGGCGGT
CTATATGAGG TGCGCCTACT AAAAAGTGAG CCAAGCTCGA CTCAGTAA
|
|---|
| Protein sequence | MNTARLFGLC LLLPLTCPFV SQPSFASLTP IPLNDVRLTA GPFLHAQQTD LAYIMSMDPE
RLLAPYRKAA GIATTADNYP NWENTGLDGH IGGHYLSALA LMYAATGDQA VLSRLNYMVA
ELEKCQQAHG NGYVGGVPHG DKLWQQVAAG HIEADLFTLN QSWVPWYNVH KVFAGLRDAY
LYTQNPTAKK MLVGFADWML DLSRNLSDEQ LQLMLRTEYG GLNETLADVY SITGQNKYLN
LANRYTDQSL LQPLLQHQDK LTGLHANTQI PKIVGVARIA ELSNNKEWLE SADYFWQQVV
HQRTVSIGGN SVREYFHPSE DFSSMLDSVE GPETCNTYNM LKLSKLLYEN KRDLRYIDYY
ERALYNHILS SQHPQTGGLV YFTPMRPDHY RVYSSAQESM WCCVGSGIEN HAKYGELIYA
EEDNNLFVNL FVDSEVHWKA KGISLSQKTQ FPDDNTSQMI IHQEADFTLN LRYPTWAKGE
VTVSINGEPQ RFTPTQGQYI PLTRHWRKGD SVTITLPMDI SLEQLPDKSA YYSVLYGPIV
LAAKTAPIAN EALNFIGDAS RMGHIASGPM CEPSQAPIFI SDGTRFLTDI RREPMSLLQF
TTGKAHTNQA SPITLIPFFR LHDSRYTLYF GQSAPDEWQQ KQQELAQKAQ MEAKLMAQTL
DSVQPGEQQP ESDHFFKASR SEAGLNGNRH WRHAEDWFSY QLDAKGEPRP ILRLTYFGLD
AGRRFDILIN DKRLAEVTLP ADKGPIFYSV DYPIPADMLL DSTVPFRVKF MAKPGSIAGG
LYEVRLLKSE PSSTQ
|
|---|
| |