Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2075 |
Symbol | |
ID | 4476321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2483751 |
End bp | 2484968 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639726660 |
Product | inner-membrane translocator |
Protein accession | YP_869711 |
Protein GI | 117920519 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.716718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000028911 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAGCT CAGCCGAAAC CCTATCATCC ACACGCATGT CCGCCGATTT GATCTCACCC CAGATGAACG CATCTGAGGC GCATTCATCT GAGCGGCAAC CGCGGATGCA GGAAAGTCAT AAGACCATGG TTCAAGAAAA AAACGCCCGT TACCAAGCGG GCAAGTCGAC CTCCATGGGT CGATATCTCT GGCCACTATT GGCATTAAGT ATTCTGTTAC TGGCCAATCT GTTTATTGAC AGCAGTTTCT TCAATATCAG CTATCAAGAC GACAGACTCT ATGGCTCTTT GATTGATATC TTAAATCGCA GTGCACCCGT GGCGCTGCTC TCGATTGGTA TGAGTCTCGT GATTGCCACT GGCGGAATTG ACCTGTCGGT AGGTGCCGTG ATGGCGATTG CGGGCGCGGT TTGCGCGAAT CTACTGTTAG TGCCGGATAT CAGTTTAGTC ACCGTCATTG CAGCAGGCCT TATCGTCGGG CTCTTAGCTG GCTGTATTAA TGGTGGGCTG GTGAGTTTCT TAGGCATTCA ACCGATTGTC GCGACCTTGC TGCTCATGGT GGCGGGGCGC GGTGTCGCTC AGCTTATCAA CCAAGGGCAA ATTATCACCT TTCAGCACCC AGGCTTTGCC GCCATTGGCG TGGGCCAGTT TTTAGGCCTG CCGATGCCAG TGTGGATTGT GATTGGGATG CTAACCTTCA GTCAATTACT GCTGCGTAAA ACCGCTTTAG GGCTTTTTAT CGAAGCGGTT GGTTGTAATG CCAAGGCGAG TCGTTACCTT GGGATCAACG ATAAATCCAT CAAACTGTTC GCCTATGGCA TTGCGGGTTT GTGCGCGGCA TTGGCCGGGA TGATCAGCAC CGCCGATATC CAAGGCTCGG ATGCGAATAA CGCTGGACTT TGGCTTGAGC TGGATGCCGT GCTGGCCGTA GTCATTGGCG GCGCAGCGCT CACGGGCGGG CGTTTCTCGT TAATTTTGTC GGTCGTTGGC GCGCTGATCA TTCAAACCTT AGCGACCACC ATTATCGTCA GTGGTTTACC CGCTAAGTTT AACTTGCTGA TCAAGGCCAT CGTTATCCTG ACCGTGCTGC TGTTGCAATC GGCTAAATTT AGGCGCCAAT TGTCGGCGCT GTTCAAATCC AAGCGCCATG CGGATGCCAA ACCAGCAGAA AAGGCCACAA GTGCAAAAGC CAGTGCCGCA ACAGGAGAAA AACTATGA
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Protein sequence | MKSSAETLSS TRMSADLISP QMNASEAHSS ERQPRMQESH KTMVQEKNAR YQAGKSTSMG RYLWPLLALS ILLLANLFID SSFFNISYQD DRLYGSLIDI LNRSAPVALL SIGMSLVIAT GGIDLSVGAV MAIAGAVCAN LLLVPDISLV TVIAAGLIVG LLAGCINGGL VSFLGIQPIV ATLLLMVAGR GVAQLINQGQ IITFQHPGFA AIGVGQFLGL PMPVWIVIGM LTFSQLLLRK TALGLFIEAV GCNAKASRYL GINDKSIKLF AYGIAGLCAA LAGMISTADI QGSDANNAGL WLELDAVLAV VIGGAALTGG RFSLILSVVG ALIIQTLATT IIVSGLPAKF NLLIKAIVIL TVLLLQSAKF RRQLSALFKS KRHADAKPAE KATSAKASAA TGEKL
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