Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2069 |
Symbol | |
ID | 4476315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2476356 |
End bp | 2477303 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639726654 |
Product | glycoside hydrolase family protein |
Protein accession | YP_869705 |
Protein GI | 117920513 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000027007 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000035019 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAGG CATTTTTGAG TGTGTGTTTG GCATTGAGTA CGAGTGTCAG CACTGCAGCG ATTGCTGCTA ACCCTCTGTT TACGGATGTA TTTACCGCCG ATCCTGCCGC CATAGTGCAC CAAGATACCG TCTATCTTTA TACTGGCCAT GACGTTGCAA AGGACAATCG CACCTTCTTC GAAATGCATG ATTGGCTCGT TTTTAGCTCT AAGGATATGC ACAATTGGAC GGCCCATGGC AGCAAGTTAT CGGTGAAGGA TTTCAGCTGG GCTAAAGGAG ATGCATGGGC TAGCCATGTG ATCGAAAAAG AAGGTCAGTT CTACTGGTAT GTGACGGCAA GACACAACAA AATCAATGGC TTTGCCATAG GTGTCGCTGT TGCTGATAGT CCACTTGGCC CCTTCAAGGA TGCCCGCGGC ACTGCCCTTA TCACCAATGA CATGACCACA GATACTGAGA TTGATTGGGA TGATATCGAT CCTGCGGTCT TTATCGATGA TGACAAGCAA GCTTATATTT TCTGGGGTAA CACTAAGCCA AGATTTGCCA AGTTAAAACC CAATATGATT GAACTCGATG GCCAAATTCA TGCCATTGAT GTGCCTAACT TTACCGAAGC GCTCTGGGTA CATAAAAAAG ATAAAACCTA TTATCTTTCA TACGCTTCAG GCTTCCCTGA AAAAATTGCC TATGCCACCA GTGATAGCAT TCTTGGCCCG TGGAAGTACC AAGGCATCTT AAATGAAGTG GCGGGTAACT CGCCGACAAA CCATCAAGCG ATTATTGAAT TTAAAGGTAA ATCCTACTTT ATCTATCATA CCGGCGCATC GCAGGATGGC GGCGGTGAGT TTAGACGTTC AGTTGCCATT GACCCGCTGC ATTACAATGC CGACGGCACC CTACAGCGCG TTCATATGAC CAGCGAAGGC ATCAGCGAGC CGCAGTAA
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Protein sequence | MKKAFLSVCL ALSTSVSTAA IAANPLFTDV FTADPAAIVH QDTVYLYTGH DVAKDNRTFF EMHDWLVFSS KDMHNWTAHG SKLSVKDFSW AKGDAWASHV IEKEGQFYWY VTARHNKING FAIGVAVADS PLGPFKDARG TALITNDMTT DTEIDWDDID PAVFIDDDKQ AYIFWGNTKP RFAKLKPNMI ELDGQIHAID VPNFTEALWV HKKDKTYYLS YASGFPEKIA YATSDSILGP WKYQGILNEV AGNSPTNHQA IIEFKGKSYF IYHTGASQDG GGEFRRSVAI DPLHYNADGT LQRVHMTSEG ISEPQ
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