Gene Shewana3_2069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2069 
Symbol 
ID4476315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2476356 
End bp2477303 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content47% 
IMG OID639726654 
Productglycoside hydrolase family protein 
Protein accessionYP_869705 
Protein GI117920513 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3507] Beta-xylosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000027007 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000035019 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAGG CATTTTTGAG TGTGTGTTTG GCATTGAGTA CGAGTGTCAG CACTGCAGCG 
ATTGCTGCTA ACCCTCTGTT TACGGATGTA TTTACCGCCG ATCCTGCCGC CATAGTGCAC
CAAGATACCG TCTATCTTTA TACTGGCCAT GACGTTGCAA AGGACAATCG CACCTTCTTC
GAAATGCATG ATTGGCTCGT TTTTAGCTCT AAGGATATGC ACAATTGGAC GGCCCATGGC
AGCAAGTTAT CGGTGAAGGA TTTCAGCTGG GCTAAAGGAG ATGCATGGGC TAGCCATGTG
ATCGAAAAAG AAGGTCAGTT CTACTGGTAT GTGACGGCAA GACACAACAA AATCAATGGC
TTTGCCATAG GTGTCGCTGT TGCTGATAGT CCACTTGGCC CCTTCAAGGA TGCCCGCGGC
ACTGCCCTTA TCACCAATGA CATGACCACA GATACTGAGA TTGATTGGGA TGATATCGAT
CCTGCGGTCT TTATCGATGA TGACAAGCAA GCTTATATTT TCTGGGGTAA CACTAAGCCA
AGATTTGCCA AGTTAAAACC CAATATGATT GAACTCGATG GCCAAATTCA TGCCATTGAT
GTGCCTAACT TTACCGAAGC GCTCTGGGTA CATAAAAAAG ATAAAACCTA TTATCTTTCA
TACGCTTCAG GCTTCCCTGA AAAAATTGCC TATGCCACCA GTGATAGCAT TCTTGGCCCG
TGGAAGTACC AAGGCATCTT AAATGAAGTG GCGGGTAACT CGCCGACAAA CCATCAAGCG
ATTATTGAAT TTAAAGGTAA ATCCTACTTT ATCTATCATA CCGGCGCATC GCAGGATGGC
GGCGGTGAGT TTAGACGTTC AGTTGCCATT GACCCGCTGC ATTACAATGC CGACGGCACC
CTACAGCGCG TTCATATGAC CAGCGAAGGC ATCAGCGAGC CGCAGTAA
 
Protein sequence
MKKAFLSVCL ALSTSVSTAA IAANPLFTDV FTADPAAIVH QDTVYLYTGH DVAKDNRTFF 
EMHDWLVFSS KDMHNWTAHG SKLSVKDFSW AKGDAWASHV IEKEGQFYWY VTARHNKING
FAIGVAVADS PLGPFKDARG TALITNDMTT DTEIDWDDID PAVFIDDDKQ AYIFWGNTKP
RFAKLKPNMI ELDGQIHAID VPNFTEALWV HKKDKTYYLS YASGFPEKIA YATSDSILGP
WKYQGILNEV AGNSPTNHQA IIEFKGKSYF IYHTGASQDG GGEFRRSVAI DPLHYNADGT
LQRVHMTSEG ISEPQ