Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2043 |
Symbol | |
ID | 4476288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2451269 |
End bp | 2453197 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639726627 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_869679 |
Protein GI | 117920487 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000275607 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0123196 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGTAA TTACACTTCC TGATGGTAGC AAGCGCGAGT TTGCACATCC CGTATCGACT CTCGATGTTG CCGCTGATAT CGGCCCTGGT CTTGCTAAAG CCTGTATCGC TGGTCGCGTG AATGGCGAAC TAAAAGACGC TTGCGATCTG ATCGAAACCG ATGCTGAACT TTCTATTATT ACCGCTAAAG ACGAAGAAGG TATTGAAATC CTTCGCCATT CTTGCGCGCA TTTATTAGGC CATGCAATCA AGCAATTATG GCCACAAACC AAGATGGCGA TCGGTCCTGT GATCGATAAC GGCTTCTATT ACGACATCGA TCTTGAGCAC AAGCTGACTC AAGAAGATAT CGAAGCCCTC GAAAAACGTA TGCTGGAATT GGCGAAAACC AATTACGACG TAGTCAAACG CGTTGTGAGC TGGCAAGAAG CCCGTGATAC CTTTGCCGCA CGCGGTGAAG AATACAAGAT CGCGATTCTG GATGAGAACA TCAGCAAAGA TGCAACTCCA GCGCTGTATC ATCACGAAGA ATACACCGAC ATGTGTCGTG GTCCACACGT GCCAAACATG CGTTTCTGCC ACCATTTCAA ATTGATGAGC ATTGCTGGCG CTTACTGGCG CGGTAACTCT GAAAACAAGA TGCTGCAACG TATTTACGGT ACAGCATGGG CGGATAAAAA AGCCCTGAGC ACCCATTTAG CCCGCCTCGA AGAAGCGGCT AAACGTGACC ACCGTAAAAT AGGTAAGCAA CTTGACCTCT ACCATATGCA AGAAGAAGCA CCAGGCATGG TGTTCTGGCA TAACGACGGT TGGAGCATCT TCCTCGAATT AGAACGTTTC ATTCGCCGTA AGTTAAATCA ATACACTTAC CAAGAAGTGA AAGGTCCGTT GATGATGGAC CGCGTTTTGT GGGAACGTTC CGGTCACTGG GATAAATACT CAGAAGCCAT GTTCACAACC AGCAGTGAAA ACCGTGAATA TGCGGTTAAG CCAATGAACT GCCCAGGCCA CGTACAGATC TTCAACCAAG GCTTGAAATC TTACCGTGAT CTGCCACTGC GTATGGCGGA ATTTGGTTGC TGTCACCGCA ATGAGCCATC AGGTTCACTG CATGGGCTGA TGCGCGTACG TGGTTTTACT CAAGACGATG CCCATATCTT CTGTACTGAA GATCAAGTTC AAGCAGAAGT TAGCTCTTGT ATCCAAATGG TATACGACAC TTACTCGACA TTTGGCTTTG AGAACATCGT TGTAAAACTG TCAACTCGCC CTGAAAAACG TATCGGTGAC GATGCAATGT GGGACAGAGC CGAAGAAGCA CTCAAGCAAG CCTTACGTGC GAACAATATC GAATTCACCA TTTTACCGGG TGAAGGTGCC TTCTACGGTC CTAAGATTGA ATTCACGCTG CACGACTGTT TAGACCGTGC ATGGCAATGC GGTACTGTGC AATTAGACTA CGCATTACCG AGCCGTTTAG GTGCAACTTA TGTCGCCGAA GATAACAGCC GTCAAACGCC TGTGATGATC CATCGTGCGA TTTTAGGCTC GTTGGAGCGT TTCTTAGGTA TTTTGATCGA AGAATACGCA GGTCGTTTCC CAACTTGGTT GGCTCCAATG CAAGTTGTCG TGATGAATAT CACCGACAAA CAGGCTGATT ATGTTGAAGA AGTGGTCAAA TTCTTCAAAG AACAAGGTAT TCGCGCCTCA TTTGACTTGA GGAATGAGAA AATAGGCTTT AAAATACGCG AGCACACCTT AAGGCGTGTT CCTTATTTAT TGGTCGTTGG CGATCAGGAA ATGGAAAATA AGGAAGTTGC GGTGCGTACA CGTGATGGCG TTGACTTAGG TAAGATGCGA ATTGAAGATT TCGCCGCTAA GATCCATCAA CAAATTTCGC TCCGTAGTCT CAAATTGTTG GAGGAATAG
|
Protein sequence | MPVITLPDGS KREFAHPVST LDVAADIGPG LAKACIAGRV NGELKDACDL IETDAELSII TAKDEEGIEI LRHSCAHLLG HAIKQLWPQT KMAIGPVIDN GFYYDIDLEH KLTQEDIEAL EKRMLELAKT NYDVVKRVVS WQEARDTFAA RGEEYKIAIL DENISKDATP ALYHHEEYTD MCRGPHVPNM RFCHHFKLMS IAGAYWRGNS ENKMLQRIYG TAWADKKALS THLARLEEAA KRDHRKIGKQ LDLYHMQEEA PGMVFWHNDG WSIFLELERF IRRKLNQYTY QEVKGPLMMD RVLWERSGHW DKYSEAMFTT SSENREYAVK PMNCPGHVQI FNQGLKSYRD LPLRMAEFGC CHRNEPSGSL HGLMRVRGFT QDDAHIFCTE DQVQAEVSSC IQMVYDTYST FGFENIVVKL STRPEKRIGD DAMWDRAEEA LKQALRANNI EFTILPGEGA FYGPKIEFTL HDCLDRAWQC GTVQLDYALP SRLGATYVAE DNSRQTPVMI HRAILGSLER FLGILIEEYA GRFPTWLAPM QVVVMNITDK QADYVEEVVK FFKEQGIRAS FDLRNEKIGF KIREHTLRRV PYLLVVGDQE MENKEVAVRT RDGVDLGKMR IEDFAAKIHQ QISLRSLKLL EE
|
| |