Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2040 |
Symbol | |
ID | 4476285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2449582 |
End bp | 2450202 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639726625 |
Product | riboflavin synthase subunit alpha |
Protein accession | YP_869677 |
Protein GI | 117920485 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0307] Riboflavin synthase alpha chain |
TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000661862 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.015006 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTACTG GTATAGTTCA AGCCACCTGT GAGGTGGTTG CAATACATAA GAAAGATGGC CTAAATACCC TTGAGGTAGC GTTTAAACCT GATTTGCATG AGGGACTTGC GATTGGCGCA AGTGTGGCAA ATAACGGGGT ATGTCTGACG GTGACTCAGG TCGTTGATGA TAGGGTATTT TTCGATGTAG TGGAAGAGAC CTTAAGGTTG ACAAACCTTG CCAATTTGAC CGTTGGTCAG CGGGTGAACA TTGAGCGTTC TTTGACGTTC GGTAGTGAAA TCGGCGGCCA TATCCTCTCG GGACACATTC ATACCAAGGC GAAAGTTAGC CACATTAGTC ACACCGAGCA GCATTATGAT CTGACCTTAA GCGTCGAGCC CAAATGGATG AACTATATCC TTTATAAAGG CTTTGTCGGG GTAAACGGTT GCAGCTTAAC GGTCGGCGAG GTGACCGAGA GCAGTTTTAT GCTGCACTTG ATCCCAGAAA CCCTCAAATT GACCAACTTA GGCCAGTGTC AGGTTGGAGA TGAGCTAAAT ATCGAAATTG ACAGCCAAAC CCAAGCCATC GTCGATACCG TCGAGCGTGT GCTGGCCAAA CGTTTTAGCG GCCAATCTTA A
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Protein sequence | MFTGIVQATC EVVAIHKKDG LNTLEVAFKP DLHEGLAIGA SVANNGVCLT VTQVVDDRVF FDVVEETLRL TNLANLTVGQ RVNIERSLTF GSEIGGHILS GHIHTKAKVS HISHTEQHYD LTLSVEPKWM NYILYKGFVG VNGCSLTVGE VTESSFMLHL IPETLKLTNL GQCQVGDELN IEIDSQTQAI VDTVERVLAK RFSGQS
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