| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2005 |
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| Symbol | |
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| ID | 4476369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2389743 |
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| End bp | 2391692 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639726587 |
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| Product | WecB/TagA/CpsF family glycosyl transferase |
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| Protein accession | YP_869642 |
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| Protein GI | 117920450 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.148419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACTC AGAACTCGAC TCAAGTACGC TGGTCTATTC GATTATTCGA TAGCGCCATT
GCGATGCTGG CCTTATTGCT CTGCTCACCT TTTATTCTTG TGGTTTACCT TTACCGCAAG
TCACAGGGAC AAAGTGTATT CGAACGTGTG TATGTGCATG GTGGCCGTAA TCAAATTGGT
CTGTGGCAAT TTGCCTACCA AGGCGCAGGA TATCGTCTCC CCCAACTGTT TAATTTACTC
AAAGGAGATA TCGGCCTATT AGGTGTTGAA GCCCAATTTG CCTTCACGCC TTTAGTCGAT
TTACCTCAAG TTAATCGTAT TGATCGAGTG GGTATATTTT CCATCAGTGC TATGCAGCGC
CGAATGGGGA TTGACTTTGA ATCCAGTGAG AAAAGCTTAA ACATCGCCTA TTCGAGCTTA
AGCCGTTACT TCTTTGCGCT GCTAAGCGCT ATTTTGAATA GCCTTTTGAC CTCTGCTTCA
CGCTCCCACA CTAACCAAGT CACGATTTTT GGCGTGACCA TGCGTAACCT CAGCATGACA
GGCATGCTCG ACATGCTAGT ACAACAAGCA CAGCACCCAA AACACCACTT AACCCCATTT
TCCTTTGTGA ATGCCGACTG TTTAAACAAA GCCTATTGCG ATCCCCAGTA CCATCAGATT
TTGAATCAAT GTGAAGCCGT TTTTGCCGAT GGCATAGGGG TACGTATGGC TTGCCGCTGG
CAAGGCGTGG ATCTCAGGGG CAATTTAAAT GGCACAGATA TGTTGCCACT CTTATGTGAG
CGCCTGATTG CAGCCAATCT GTCTCTCTAT CTGCTGGGCG GCGCGCCAGA AGTCGCCCAC
CAAGCCGCCG AACAGCTTCA GTGTCGTTTC CCACAATTAA AAATTGCAGG CACCCACCAT
GGTTATTTCC ATGAGGCAGA TACCAAGCAA GTGATTAAAA AGATTAATCA ATCTGGCGCT
GCCGTGCTGT TGGTGGCCAT GGGCGCCCCT AAACAAGAGC TATGGTTGAA TCAATATCAA
GCAAAACTTA CTCCTGCGGT CGGTATTGGT GTGGGCGGAC TGTTCGACTT TTACTCCAAT
CGTATTAGCC GCGCGCCACT TTGGTTAAGG CAAATTGGCA TGGAGTGGAT CTGGCGCTTA
ATGCAAGAGC CCAAGAGAAT GTGGCGCCGC TACATTATCG GTAATCCCCT GTTTTTATAT
CGGGTATTCA AAGAACTGCG TGCTAACGCC AGCCTTAATG CAAAGACTCA AGCTGACGTA
CAACAAACAC CCGCTACGCC CCAGTTTCCT AACTTAAGTG ACTCAGGCTC ACTGAAACGC
TGCAAACGCA TCCGCTTGCA TCTGCTATTG AACCGCATCG TTAAACGTTG CCTCGATATC
TTAGTCGCGG CCATCGCCAT ACTGTTACTA TCGCCTCTAC TGTTGATCGT TGCACTGCTT
ATTCGATTGG AATCCCCAGG CGCCGTGCTG TTTTGCCAGC AGCGCGTCGG CAAGTGGAAT
CAACCTTTTA CCATGTGGAA ATTCCGCTCC ATGTATCAGG ACGCCGAAAC GCGACTGGCC
AGCTTACAAC AGGCGAACGA AATGCAAGGC GGCGTCCTAT TTAAGATGAA ACAGGACCCC
AGGATCACCC GTGTCGGTCA ATTTATCCGT AAAACCTCCA TCGATGAGCT GCCACAGCTA
TGGAATGTAC TCAAGGGCGA GATGTCACTG GTTGGCCCGC GCCCCGCGCT ACCACGAGAA
GTCGCGCAAT ACAGTCCAAG CGATCGCCGC CGCTTAGAAG TTAAACCCGG CATAACCTGC
ATCTGGCAAG TATCGGGTCG CTCCGACATT CCCTTCGACC GTCAGGTTGA GTTGGATGTG
GATTATATCT ACCAACAATC CTTAATGGCG GATCTGTCCT TGCTTATCAA GACCATACCC
GCCGTGATTT TCAGCCGTGG TGCCTACTAA
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| Protein sequence | MNTQNSTQVR WSIRLFDSAI AMLALLLCSP FILVVYLYRK SQGQSVFERV YVHGGRNQIG
LWQFAYQGAG YRLPQLFNLL KGDIGLLGVE AQFAFTPLVD LPQVNRIDRV GIFSISAMQR
RMGIDFESSE KSLNIAYSSL SRYFFALLSA ILNSLLTSAS RSHTNQVTIF GVTMRNLSMT
GMLDMLVQQA QHPKHHLTPF SFVNADCLNK AYCDPQYHQI LNQCEAVFAD GIGVRMACRW
QGVDLRGNLN GTDMLPLLCE RLIAANLSLY LLGGAPEVAH QAAEQLQCRF PQLKIAGTHH
GYFHEADTKQ VIKKINQSGA AVLLVAMGAP KQELWLNQYQ AKLTPAVGIG VGGLFDFYSN
RISRAPLWLR QIGMEWIWRL MQEPKRMWRR YIIGNPLFLY RVFKELRANA SLNAKTQADV
QQTPATPQFP NLSDSGSLKR CKRIRLHLLL NRIVKRCLDI LVAAIAILLL SPLLLIVALL
IRLESPGAVL FCQQRVGKWN QPFTMWKFRS MYQDAETRLA SLQQANEMQG GVLFKMKQDP
RITRVGQFIR KTSIDELPQL WNVLKGEMSL VGPRPALPRE VAQYSPSDRR RLEVKPGITC
IWQVSGRSDI PFDRQVELDV DYIYQQSLMA DLSLLIKTIP AVIFSRGAY
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