Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2002 |
Symbol | |
ID | 4476366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2386366 |
End bp | 2387763 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639726584 |
Product | peptidyl-dipeptidase A |
Protein accession | YP_869639 |
Protein GI | 117920447 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.135613 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCACAA ATCTAGCATT AGCCTTACTG AAGAAATGCA TTTTCACCCT CTCTTGGTTA GTACCAAGAA ACGCTAACAA GGCGGTATTA GGTTGCTACA AGAACCGTTT TGCTGACAAT AGCAAATACC TGTTTTTGCA TTGGCAGCAG ACGCACTTTA TGCAAACCAT TTGGATAAGC GGCGATAAAG CCCTTATCCA TGCCCTCAGG CAACAAGGCT ATACCGCCCA TTCGCGCTGG AGCCTGCTGG GCATTTACCA TGCGCTCACG GCCAAATACT ATGTGTACAA TAGTTATATT GGCGATATTA ATCAGTGGCT TGCAGCAGGC GCGATTCGTA TCAATCTCTG GCATGGCTCG CCACTTAAAA AAATCGAGTT TGATATCACC ACAGGGCCAT TGGCCCCCAA GTATCAAACC CAGTCCCTTT GGCAAGCTGG GCTGCAGGCG CTGCGTTATC ATCAGGAATA TGTCCGTCCG AGTTTGATGC TAAGCCCAAG CCCATTGGTC GGTGAGAGTT TCCGACGCGC CTTTCGGTTA AAAGAAGATT CCCTGCTATC AAGCACTAAT CCGCGCACCG ATTACTATCT GCGTTACCCA GAGCAACGCC AAACGTTGCC CTTAAAGGCG GATGCGACGG CCTATCGCCG AGTGATTCTC TACGCCCCTT CTTGGCGGGA TGCCCTATGG CAAAATAGTC AGAATGTAGC TTCACATTCG ACCCCACATT TAACGGGAGG TCATAGCGAT TCGCCCTACC AAGCCGCCTT TGACTGGCAA AGCCTGTCCC AACATTTAGT CGATACAGAT ACCTTGTTAC TGTTACGCCT GCATCCCAAT GAACGCCACT ACGCAGCGCA GTTTTGTGCC TATCCCAATG TACTCGATAT CAGCGATTGG GACAATATTT ATGGGATTTT GCATCGTGTC GACCTGCTGA TCACCGATTA TTCGTCGTTA TTTATCGATG TACTGCCACT TGAGATCCCT GTCCTCTTCT ACCGTTTTGA CCATGAGCAG TATCTCAACC AAAGCCGTGA TTGCTACGAT ATAGGTCAAG ATCCGCTCAG TATTGGCCAG GTCGCCTATC AATTCGATGA CTTATTGGCA CTGCTGCAAG AGATGAGTCA CCTTAACGCC AAACCCCAGC CCTGCGAGGC TTACAAACAA TTACAGCGTT TGTATTGGTC GCAGCATGCT ATGGGTTCAT CAGCAGACAG TTTAGCGACT GATGGTTTGT CTATTGATGG TGTATCTATG GTTTGTGTAT CTATGGTTGG TATATCTATG AATGAAAGGC ATGATGATAG TTTTGCGCGC TTAGAACGGC ATCTGCGCCA AGGGCAAACT CAGTCGTATA AGTTGGCCTT TGGCACTGAT ATCAAGCCTC AAATATGA
|
Protein sequence | MGTNLALALL KKCIFTLSWL VPRNANKAVL GCYKNRFADN SKYLFLHWQQ THFMQTIWIS GDKALIHALR QQGYTAHSRW SLLGIYHALT AKYYVYNSYI GDINQWLAAG AIRINLWHGS PLKKIEFDIT TGPLAPKYQT QSLWQAGLQA LRYHQEYVRP SLMLSPSPLV GESFRRAFRL KEDSLLSSTN PRTDYYLRYP EQRQTLPLKA DATAYRRVIL YAPSWRDALW QNSQNVASHS TPHLTGGHSD SPYQAAFDWQ SLSQHLVDTD TLLLLRLHPN ERHYAAQFCA YPNVLDISDW DNIYGILHRV DLLITDYSSL FIDVLPLEIP VLFYRFDHEQ YLNQSRDCYD IGQDPLSIGQ VAYQFDDLLA LLQEMSHLNA KPQPCEAYKQ LQRLYWSQHA MGSSADSLAT DGLSIDGVSM VCVSMVGISM NERHDDSFAR LERHLRQGQT QSYKLAFGTD IKPQI
|
| |