| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1994 |
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| Symbol | |
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| ID | 4476358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2376345 |
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| End bp | 2377832 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639726576 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_869631 |
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| Protein GI | 117920439 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.184092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0261874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTAAGC ATCATACTCT CTCCAGCCAT CCATCGTCGG CGACTCGGCC TGTGATGCAG
TCTGTTTCAG TGGGTTTGCG TTTAAAGCCG CTTTATTTGG GACTCGTGAC GGCATTGAGT
GTTGCAGGCT GCGCCATGGG GCCCGATTAC CAGCGGCCAG AGCTAGTGTT ACCGAATCAG
TATCAAGCGC AAATGTTGTC GCAAACCACT GCTGAGCAGG GGAATGTAAA GGAAGTCTCG
GCCCTATCAT GGCGGCATTT TTATCAAGAC CCTGTGCTGA TTTCCTTGAT TGAGCATGCG
CTGGCGAACA ATCTGGATTT GCAAATGGCG CAGTCGCGCC TTCTCGCTGC ACGTTCAAAA
ATGACAGTGG TCGACAGTGC GCTTTGGCCT GAGGTTTCAG TCAAAGCGGG ATATGAACGC
AGTTTAGATA GCGGTGCAAC CAGCACTAAT CCAAGTCCGA GTACCACCTT AGATTTAGGC
GGCGCGGTTT CGTGGGAGCT AGACCTTTGG GGCGCAAACC GCAGGGCGAG CGAGGCTGCT
ATGGCTGATT ATCTTTCGGA GGTTGAAAAG CTCAGGCTCA CCTATGTCAG CCTTATCAGT
GATATTGCTA GCCGTTATTA CGAATGGCTC GATATCGAGC AGCGTTATAG TGTGTCTATC
GACACCGTGG GATTACGGCA GAAGGAACTG GATATCGCCA AGCTTCGCCA TGCTAATGGC
GTGATTTCGG GCCTCGATGT GCGTCAGGCA GAAGTTGAGC TTCAAAGCAC CAAAGTGACC
TTGCCGACAT TAGACTACGA AAGAAAATAT AAAATAAATC AGTTGCATAT CTTACTCGGT
GAATATGATT ATGCTTTACC ATCTCCCCAA GGCTTACCCG AAAATATGGG TTTACCCTAT
GAACTCAACA CAGGTGTTCC TTCTGAATTG TTGACATTAA GACCCGATGT CAAAATTGCC
GAGCAGCAGA TGATTGCAGC GAATGCGGAA GTGGGTATCG CCAAGGCGGC CTTTTTCCCT
AAATTTACCA TTTCGGGTGT GTATGGTCGG GAGAATGATC ATCTTAAAGA TATCTTCGAC
AGTAATGGTG TCACTTGGTC ACTGCTTGGC GGCATTAGTG CACCGATTTT TAACCGCGGA
AAGATTGCTG CTGAATATGA TATCGCCACC GAAGCCGCGA AACAGTCGAT GTTAAGTTAC
CGCAATGTGG TGCTGACCGC TTACTTTGAT GTGAACGATG CGCTGAATAA TCTTAAACGT
GCCCAAGAGG CCATCAAAGC GCAAAAGGAA TTAGTTGAAT CTTCATCGGC TTATGCACGT
CTTGCACGAC TGCGTTACCA AAATGGTGTT GCCACTTCGC TGGATTTAAT GGATGCGCAG
CGGCAATTGT TTAGCGCCCA ATTGGCCTAC AGCGAGATCT TAAGGGATAA GCAATTGGCC
AAAATCGCCC TGTATCGAGC CCTCGGTGGT GGTGCAGTCA GTGAATAA
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| Protein sequence | MVKHHTLSSH PSSATRPVMQ SVSVGLRLKP LYLGLVTALS VAGCAMGPDY QRPELVLPNQ
YQAQMLSQTT AEQGNVKEVS ALSWRHFYQD PVLISLIEHA LANNLDLQMA QSRLLAARSK
MTVVDSALWP EVSVKAGYER SLDSGATSTN PSPSTTLDLG GAVSWELDLW GANRRASEAA
MADYLSEVEK LRLTYVSLIS DIASRYYEWL DIEQRYSVSI DTVGLRQKEL DIAKLRHANG
VISGLDVRQA EVELQSTKVT LPTLDYERKY KINQLHILLG EYDYALPSPQ GLPENMGLPY
ELNTGVPSEL LTLRPDVKIA EQQMIAANAE VGIAKAAFFP KFTISGVYGR ENDHLKDIFD
SNGVTWSLLG GISAPIFNRG KIAAEYDIAT EAAKQSMLSY RNVVLTAYFD VNDALNNLKR
AQEAIKAQKE LVESSSAYAR LARLRYQNGV ATSLDLMDAQ RQLFSAQLAY SEILRDKQLA
KIALYRALGG GAVSE
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