Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1991 |
Symbol | |
ID | 4476355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2370904 |
End bp | 2371668 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639726573 |
Product | DTW domain-containing protein |
Protein accession | YP_869628 |
Protein GI | 117920436 |
COG category | [S] Function unknown |
COG ID | [COG3148] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.801996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00115033 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCTCTAG CCCCCCACGC TGTACATCGC TTATATGAAT ACCGTAAATC CATATCGACT AAGCCCTTTG GCGCCCGCGG TAAAAAACTG ATCCGCTGTC ATTTTTGCCT ATTGGGCGAG CAATTTTGTA CCTGTTCACT GCGTAAACAG TTGACCACTC AGGCCAGTTT TCTGCTGCTG ATGTATAACG ATGAGGTCTT AAAGCCGACC AACAGCGGTC GCTTAATTGC CGATCTTATC CCGGATACCC ATGCCTTTCT CTGGTCGCGC ACCGAACCCG CCCCTGAGTT GTTGGCACTA TTGGCTTCAA GCGACTATCA GCCCTTTTTA GTCTTTCCGG CGCAATATGC CGACCAAGGA CAAACCGTAT TGACTGAGGT GCCTATGGAC AGTCTTGCCG AGGGGAAACG ACCTTTGCTG ATTATGCTCG ACGGCAGTTG GCGTGAGGCG ATTAAGATGT TTCGCAAAAG CACTTATTTG CAGGGGTTGC CTATGCTGTC CTTCGACCCC GATACCTTAG CCACCTATGC CTTACGTAAG GGAAGCCATG ACTTTCAATT AGGGACGGCA GAAGTTGCCT CACTTGCGCT GGCGGCAATG GGCGAGGAGG CTAATGGTAA GGCACTAACG GCTTGGTTCG ATCTGTTTGT GGAGTCCTCA TTGCTCGGGC GCAATCGCCG CTGCCGCGAG GATATTTTAC CCATCAGCGA GTTTACCGAC GCCTTCGAAG CGGCGTACTG CGCCGCAACG CCAATCAGTG TTTAA
|
Protein sequence | MALAPHAVHR LYEYRKSIST KPFGARGKKL IRCHFCLLGE QFCTCSLRKQ LTTQASFLLL MYNDEVLKPT NSGRLIADLI PDTHAFLWSR TEPAPELLAL LASSDYQPFL VFPAQYADQG QTVLTEVPMD SLAEGKRPLL IMLDGSWREA IKMFRKSTYL QGLPMLSFDP DTLATYALRK GSHDFQLGTA EVASLALAAM GEEANGKALT AWFDLFVESS LLGRNRRCRE DILPISEFTD AFEAAYCAAT PISV
|
| |