Gene Shewana3_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1991 
Symbol 
ID4476355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2370904 
End bp2371668 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content52% 
IMG OID639726573 
ProductDTW domain-containing protein 
Protein accessionYP_869628 
Protein GI117920436 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.801996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00115033 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTCTAG CCCCCCACGC TGTACATCGC TTATATGAAT ACCGTAAATC CATATCGACT 
AAGCCCTTTG GCGCCCGCGG TAAAAAACTG ATCCGCTGTC ATTTTTGCCT ATTGGGCGAG
CAATTTTGTA CCTGTTCACT GCGTAAACAG TTGACCACTC AGGCCAGTTT TCTGCTGCTG
ATGTATAACG ATGAGGTCTT AAAGCCGACC AACAGCGGTC GCTTAATTGC CGATCTTATC
CCGGATACCC ATGCCTTTCT CTGGTCGCGC ACCGAACCCG CCCCTGAGTT GTTGGCACTA
TTGGCTTCAA GCGACTATCA GCCCTTTTTA GTCTTTCCGG CGCAATATGC CGACCAAGGA
CAAACCGTAT TGACTGAGGT GCCTATGGAC AGTCTTGCCG AGGGGAAACG ACCTTTGCTG
ATTATGCTCG ACGGCAGTTG GCGTGAGGCG ATTAAGATGT TTCGCAAAAG CACTTATTTG
CAGGGGTTGC CTATGCTGTC CTTCGACCCC GATACCTTAG CCACCTATGC CTTACGTAAG
GGAAGCCATG ACTTTCAATT AGGGACGGCA GAAGTTGCCT CACTTGCGCT GGCGGCAATG
GGCGAGGAGG CTAATGGTAA GGCACTAACG GCTTGGTTCG ATCTGTTTGT GGAGTCCTCA
TTGCTCGGGC GCAATCGCCG CTGCCGCGAG GATATTTTAC CCATCAGCGA GTTTACCGAC
GCCTTCGAAG CGGCGTACTG CGCCGCAACG CCAATCAGTG TTTAA
 
Protein sequence
MALAPHAVHR LYEYRKSIST KPFGARGKKL IRCHFCLLGE QFCTCSLRKQ LTTQASFLLL 
MYNDEVLKPT NSGRLIADLI PDTHAFLWSR TEPAPELLAL LASSDYQPFL VFPAQYADQG
QTVLTEVPMD SLAEGKRPLL IMLDGSWREA IKMFRKSTYL QGLPMLSFDP DTLATYALRK
GSHDFQLGTA EVASLALAAM GEEANGKALT AWFDLFVESS LLGRNRRCRE DILPISEFTD
AFEAAYCAAT PISV